RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 UNKQ9C0B0 810 aaKnown RBP17.18■□□□□ 0.34
TTC3-209ENST00000438055 SIK2Q9H0K1 926 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 SERPINE1P05121 402 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 CPA3P15088 417 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 CNTFP26441 200 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 USP4Q13107 963 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 PYDC1Q8WXC3 89 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 KRT82Q9NSB4 513 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 C20orf96Q9NUD7 363 aaPredicted RBP17.17■□□□□ 0.34
TTC3-209ENST00000438055 PACSIN3Q9UKS6 424 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 SOX13Q9UN79 622 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 PLIN3O60664 434 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 PROCP04070 461 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 ZCCHC18P0CG32 403 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 GP5P40197 560 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 COPAP53621 1224 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 SLC25A52Q3SY17 297 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 IZUMO2Q6UXV1 221 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 CERS2Q96G23 380 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 CELF6Q96J87 481 aaKnown RBP17.17■□□□□ 0.34
TTC3-209ENST00000438055 ZNF333Q96JL9 665 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 MORF4L1Q9UBU8 362 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 BIRC5O15392 142 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 DCXO43602 365 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 SERPINA6P08185 405 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 MMP3P08254 477 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 GLRBP48167 497 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 DLG2Q15700 870 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 ARCQ7LC44 396 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 SDCCAG8Q86SQ7 713 aaPredicted RBP17.17■□□□□ 0.34
TTC3-209ENST00000438055 HSFY1Q96LI6 401 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 SLC7A8Q9UHI5 535 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 SLC39A10Q9ULF5 831 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 VANGL2Q9ULK5 521 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 LRCH1Q9Y2L9 728 aa17.17■□□□□ 0.34
TTC3-209ENST00000438055 MYL3P08590 195 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 SRGAP2BP0DMP2 458 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 CCNFP41002 786 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 WASHC5Q12768 1159 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 SV2CQ496J9 727 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 ARHGAP17Q68EM7 881 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 LRRC8BQ6P9F7 803 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 HFE2Q6ZVN8 426 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 IFNLR1Q8IU57 520 aaPredicted RBP17.16■□□□□ 0.34
TTC3-209ENST00000438055 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 ULBP1Q9BZM6 244 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 STX18Q9P2W9 335 aaKnown RBP17.16■□□□□ 0.34
TTC3-209ENST00000438055 CORO1CQ9ULV4 474 aaPredicted RBP17.16■□□□□ 0.34
TTC3-209ENST00000438055 C1QAP02745 245 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 ERCC2P18074 760 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 SPRP35270 261 aaPredicted RBP17.16■□□□□ 0.34
TTC3-209ENST00000438055 TRMT5Q32P41 509 aaKnown RBP17.16■□□□□ 0.34
TTC3-209ENST00000438055 RALGPS1Q5JS13 557 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 MARCH8Q5T0T0 291 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 STRADAQ7RTN6 431 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 DCLK2Q8N568 766 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 NRG4Q8WWG1 115 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 DDX50Q9BQ39 737 aaKnown RBP17.16■□□□□ 0.34
TTC3-209ENST00000438055 MOCS1Q9NZB8 636 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 TLK1Q9UKI8 766 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 HACD1B0YJ81 288 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 BEST1O76090 585 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 ACADSP16219 412 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 CCL15Q16663 113 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 TEX44Q53QW1 395 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 PDPK2PQ6A1A2 396 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 AGAP2Q99490 1192 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 MMADHCQ9H3L0 296 aaPredicted RBP17.16■□□□□ 0.34
TTC3-209ENST00000438055 SNX15Q9NRS6 342 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 FZD10Q9ULW2 581 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 KCNH4Q9UQ05 1017 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 FIS1Q9Y3D6 152 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 SCN1AP35498 2009 aa17.16■□□□□ 0.34
TTC3-209ENST00000438055 CFLARO15519 480 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 KLHL2O95198 593 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 STAU1O95793 577 aaKnown RBP17.15■□□□□ 0.34
TTC3-209ENST00000438055 FAM200BP0CF97 657 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 AVPR1AP37288 418 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 CCNG1P51959 295 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 TCHHL1Q5QJ38 904 aaPredicted RBP17.15■□□□□ 0.34
TTC3-209ENST00000438055 NAIF1Q69YI7 327 aaPredicted RBP17.15■□□□□ 0.34
TTC3-209ENST00000438055 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 KBTBD7Q8WVZ9 684 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 MFSD3Q96ES6 412 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 LRRC40Q9H9A6 602 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 IARS2Q9NSE4 1012 aaKnown RBP17.15■□□□□ 0.34
TTC3-209ENST00000438055 SNX10Q9Y5X0 201 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 A0A096LPK6 155 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 RRN3P2A6NIE6 340 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 AP1G2O75843 785 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 TM7SF2O76062 418 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 JCHAINP01591 159 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 SMIM10L2AP0DMW4 78 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 SMIM10L2BP0DMW5 78 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 NOS2P35228 1153 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 CERCAMQ5T4B2 595 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 TEDDM1Q5T9Z0 273 aa17.15■□□□□ 0.34
TTC3-209ENST00000438055 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.15■□□□□ 0.345e-7■■□□□ 11.6
TTC3-209ENST00000438055 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms