RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 BCAT1P54687 386 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 PCBP1Q15365 356 aaKnown RBP eCLIP9.74□□□□□ -0.856e-6■■■■■ 34.5
CUX1-206ENST00000437600 XKR4Q5GH76 650 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 RNF43Q68DV7 783 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 CEP128Q6ZU80 1094 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ASRGL1Q7L266 308 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 LONP2Q86WA8 852 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 FBXO27Q8NI29 283 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 TTC8Q8TAM2 541 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 AGR3Q8TD06 166 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 HTR3CQ8WXA8 447 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 SLC7A6OSQ96CW6 309 aaPredicted RBP9.74□□□□□ -0.85
CUX1-206ENST00000437600 SHCBP1LQ9BZQ2 653 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 KCNK13Q9HB14 408 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ARHGEF4Q9NR80 690 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ARL8BQ9NVJ2 186 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 CHADO15335 359 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 B4GALT3O60512 393 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 KPNA6O60684 536 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 RFPL1O75677 317 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ZWINTO95229 277 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ARL4AP40617 200 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ETV4P43268 484 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 TMPRSS15P98073 1019 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 MBTPS1Q14703 1052 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 SLC45A4Q5BKX6 768 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 RFWD3Q6PCD5 774 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 CLEC20AQ6ZU45 233 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 SLC26A9Q7LBE3 791 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 UNC93AQ86WB7 457 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ARID3BQ8IVW6 561 aaPredicted RBP9.74□□□□□ -0.85
CUX1-206ENST00000437600 USP33Q8TEY7 942 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 PGBD4Q96DM1 585 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 PCED1BQ96HM7 432 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 SCLYQ96I15 445 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 FAM210AQ96ND0 272 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 PPP1R12CQ9BZL4 782 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ULBP1Q9BZM6 244 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 GDAP2Q9NXN4 497 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 BCLAF3A2AJT9 711 aaKnown RBP9.74□□□□□ -0.85
CUX1-206ENST00000437600 GPR182O15218 404 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ATP9BO43861 1147 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 APOEP02649 317 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 FYNP06241 537 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 GSTA1P08263 222 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 OR4Q2P0C623 313 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 CKBP12277 381 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 ALDH3A1P30838 453 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 SESN3P58005 492 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 MGAT3Q09327 533 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 BST1Q10588 318 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 CRYMQ14894 314 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 CHI3L2Q15782 390 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 DPYSL2Q16555 572 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 CRYBG2Q8N1P7 616 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 TFB1MQ8WVM0 346 aaKnown RBP9.74□□□□□ -0.85
CUX1-206ENST00000437600 OXNAD1Q96HP4 312 aaPredicted RBP9.74□□□□□ -0.85
CUX1-206ENST00000437600 TNIP3Q96KP6 325 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 TMEM120AQ9BXJ8 343 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 SENP1Q9P0U3 644 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 MOXD2PA6NHM9 499 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 RNF103O00237 685 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 MDM4O15151 490 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 SNRPAP09012 282 aaKnown RBP9.73□□□□□ -0.85
CUX1-206ENST00000437600 TGM2P21980 687 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 PNPLA4P41247 253 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 MATKP42679 507 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 PGFP49763 221 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
CUX1-206ENST00000437600 ARFIP2P53365 341 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 CCL23P55773 120 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 SARNPP82979 210 aaKnown RBP9.73□□□□□ -0.85
CUX1-206ENST00000437600 DEUP1Q05D60 604 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 HSF5Q4G112 596 aaPredicted RBP9.73□□□□□ -0.85
CUX1-206ENST00000437600 OTUD1Q5VV17 481 aaPredicted RBP9.73□□□□□ -0.85
CUX1-206ENST00000437600 ATG14Q6ZNE5 492 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 CLNKQ7Z7G1 428 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 CMC1Q7Z7K0 106 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 TNS4Q8IZW8 715 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 SIX6OS1Q8N1H7 587 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 OR52K1Q8NGK4 314 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 RNF139Q8WU17 664 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 ZNF333Q96JL9 665 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 EBNA1BP2Q99848 306 aaKnown RBP9.73□□□□□ -0.85
CUX1-206ENST00000437600 ZNF670Q9BS34 389 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 HCSTQ9UBK5 93 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 PRG3Q9Y2Y8 225 aaPredicted RBP9.73□□□□□ -0.85
CUX1-206ENST00000437600 AP1G2O75843 785 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 PRMT2P55345 433 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 RCN2Q14257 317 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 DLG2Q15700 870 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 TTC39BQ5VTQ0 682 aaPredicted RBP9.73□□□□□ -0.85
CUX1-206ENST00000437600 ARHGAP17Q68EM7 881 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 ZNF280BQ86YH2 543 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 SCAMP5Q8TAC9 235 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 NSMCE1Q8WV22 266 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 ATP2A3Q93084 1043 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 GRAMD1AQ96CP6 724 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 PPP1R36Q96LQ0 422 aa9.73□□□□□ -0.85
CUX1-206ENST00000437600 ZNF778Q96MU6 729 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms