RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IFNKQ9P0W0 207 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 CALCOCO1Q9P1Z2 691 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 SPTBN4Q9H254 2564 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 THADAQ6YHU6 1953 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 A0A1W2PQJ5 194 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 WASH3PC4AMC7 463 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 LRP3O75074 770 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 PAGE1O75459 146 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 ENDOD1O94919 500 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 MOCS3O95396 460 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 ADCY5O95622 1261 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 ASLP04424 464 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 DLDP09622 509 aaKnown RBP16.79■□□□□ 0.28
SMPD4-207ENST00000435455 KRT3P12035 628 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 GABRG2P18507 467 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 SDC4P31431 198 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
SMPD4-207ENST00000435455 IL12RB1P42701 662 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 PTPN9P43378 593 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 OXCT1P55809 520 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 KLHL30Q0D2K2 578 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 LMAN2Q12907 356 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 SLC12A1Q13621 1099 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 AUHQ13825 339 aaKnown RBP16.79■□□□□ 0.28
SMPD4-207ENST00000435455 FNDC3BQ53EP0 1204 aaKnown RBP16.79■□□□□ 0.28
SMPD4-207ENST00000435455 ACAD10Q6JQN1 1059 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 TRNP1Q6NT89 227 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 KIAA1211LQ6NV74 962 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 FBXL22Q6P050 247 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 SERPINA13PQ6UXR4 307 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 BNIPLQ7Z465 357 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 KBTBD6Q86V97 674 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 EMC1Q8N766 993 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 RXFP2Q8WXD0 754 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 SORCS1Q8WY21 1168 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 TTC17Q96AE7 1141 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 VCPIP1Q96JH7 1222 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 LMLNQ96KR4 655 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 SPACA7Q96KW9 195 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 SELENOOQ9BVL4 669 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 SIK2Q9H0K1 926 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 CD248Q9HCU0 757 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 KIAA1522Q9P206 1035 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-207ENST00000435455 HS3ST4Q9Y661 456 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 ABCA7Q8IZY2 2146 aa16.79■□□□□ 0.28
SMPD4-207ENST00000435455 ANKRD62A6NC57 917 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 C2CD4BA6NLJ0 364 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 SIGLEC16A6NMB1 481 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 SYNCRIPO60506 623 aaKnown RBP16.78■□□□□ 0.28
SMPD4-207ENST00000435455 RHOBTB1O94844 696 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 P2RY2P41231 377 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 ATP11AP98196 1134 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 FUT11Q495W5 492 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 PLK5Q496M5 336 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 DNAJC24Q6P3W2 148 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 LRRC31Q6UY01 552 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 PHLDB2Q86SQ0 1253 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 MCOLN2Q8IZK6 566 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 CCAR2Q8N163 923 aaKnown RBP16.78■□□□□ 0.28
SMPD4-207ENST00000435455 SYN2Q92777 582 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-207ENST00000435455 C1orf74Q96LT6 269 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 HAPLN3Q96S86 360 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 PPP1R9BQ96SB3 815 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 HAUS4Q9H6D7 363 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 VANGL2Q9ULK5 521 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 RAD54BQ9Y620 910 aa16.78■□□□□ 0.28
SMPD4-207ENST00000435455 MUC22E2RYF6 1773 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-207ENST00000435455 DCLK1O15075 740 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 CBFA2T2O43439 604 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 CLDN11O75508 207 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 EPHX1P07099 455 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 NDUFV2P19404 249 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 CSKP41240 450 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 ST8SIA6P61647 398 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 ZBED6P86452 979 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 CCDC14Q49A88 953 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 C5orf22Q49AR2 442 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 FSCBQ5H9T9 825 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 PITRM1Q5JRX3 1037 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 E4F1Q66K89 784 aaPredicted RBP16.77■□□□□ 0.28
SMPD4-207ENST00000435455 STRADAQ7RTN6 431 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 ZNF571Q7Z3V5 609 aaPredicted RBP16.77■□□□□ 0.28
SMPD4-207ENST00000435455 FAM131BQ86XD5 332 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 DCLK2Q8N568 766 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 JOSD2Q8TAC2 188 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 CYB5D2Q8WUJ1 264 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 DUSP15Q9H1R2 295 aaPredicted RBP16.77■□□□□ 0.28
SMPD4-207ENST00000435455 INTS6Q9UL03 887 aaKnown RBP16.77■□□□□ 0.28
SMPD4-207ENST00000435455 INVSQ9Y283 1065 aa16.77■□□□□ 0.28
SMPD4-207ENST00000435455 BZW2Q9Y6E2 419 aaKnown RBP16.77■□□□□ 0.28
SMPD4-207ENST00000435455 DOCK4Q8N1I0 1966 aa16.77■□□□□ 0.27
SMPD4-207ENST00000435455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.76■□□□□ 0.27
SMPD4-207ENST00000435455 ZNF217O75362 1048 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 EPN2O95208 641 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 GJB6O95452 261 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 GZMAP12544 262 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 DESP17661 470 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 GPD1P21695 349 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 PRKCHP24723 683 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 RFC1P35251 1148 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms