RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 DDX18Q9NVP1 670 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 KLHL8Q9P2G9 620 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 GTF2IRD1Q9UHL9 959 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF214Q9UL59 606 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TMED5Q9Y3A6 229 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HBS1LQ9Y450 684 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SIPA1L1O43166 1804 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 C17orf102A2RUQ5 167 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MBLAC1A4D2B0 266 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DCDC2CA8MYV0 355 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 H3BRB1 525 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ENC1O14682 589 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TLR2O60603 784 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TSPAN1O60635 241 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ADRB2P07550 413 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TPBGLP0DKB5 382 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DDX6P26196 483 aaKnown RBP eCLIP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CRYBB1P53674 252 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ITGA8P53708 1063 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RAD23AP54725 363 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 EIF3EP60228 445 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TCP10Q12799 353 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TRAP1Q12931 704 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 LINC00471Q8N535 108 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 BCL7CQ8WUZ0 217 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TUT1Q9H6E5 874 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 AP4E1Q9UPM8 1137 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MTMR7Q9Y216 660 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 INPP5FQ9Y2H2 1132 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SNCAIPQ9Y6H5 919 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 USP27XA6NNY8 438 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF197O14709 1029 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MSH3P20585 1137 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ATP13A4Q4VNC1 1196 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TPGS2Q68CL5 300 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 GALNT18Q6P9A2 607 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ACDQ96AP0 544 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TSGA13Q96PP4 275 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 OSBPL2Q9H1P3 480 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 KRCC1Q9NPI7 259 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 C15orf41Q9Y2V0 281 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TDRD15B5MCY1 1934 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 EEF2KO00418 725 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 AHCYL1O43865 530 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 USP1O94782 785 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 EOMESO95936 686 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MYL2P10916 166 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TYK2P29597 1187 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TUBA4AP68366 448 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CXCL9Q07325 125 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PPIDQ08752 370 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TWF2Q6IBS0 349 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CAMK1DQ8IU85 385 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 EID3Q8N140 333 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 C17orf53Q8N3J3 647 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ULK4Q96C45 1275 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 BDH2Q9BUT1 245 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 DOCK3Q8IZD9 2030 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ICE1Q9Y2F5 2266 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SCN1AP35498 2009 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 HTR3EA5X5Y0 456 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SLC7A4O43246 635 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ZW10O43264 779 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MGRN1O60291 552 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 KRT19P08727 400 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PSMA3P25788 255 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 RPL34P49207 117 aaKnown RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 SEMA5AQ13591 1074 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CARNMT1Q8N4J0 409 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TRIML2Q8N7C3 387 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 DNAAF3Q8N9W5 541 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CSGALNACT1Q8TDX6 532 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TAS1R2Q8TE23 839 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 OXNAD1Q96HP4 312 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 BTN2A3PQ96KV6 586 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 QRFPRQ96P65 431 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TLE6Q9H808 572 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ABCC13Q9NSE7 274 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 FAM198AQ9UFP1 575 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TBC1D30Q9Y2I9 924 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 A0A087WZ62 844 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MPZL2O60487 215 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 MGEA5O60502 916 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 UNGP13051 313 aaPredicted RBP3.85□□□□□ -1.79
SHPRH-205ENST00000433355 RRM1P23921 792 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CRHR1P34998 444 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PKNOX1P55347 436 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF235Q14590 738 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM259Q4ZIN3 620 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 WLSQ5T9L3 541 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 GPAT2Q6NUI2 795 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ERICH5Q6P6B1 374 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 BORAQ6PGQ7 559 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CCDC149Q6ZUS6 474 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ATP6V0D2Q8N8Y2 350 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 ICA1LQ8NDH6 482 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 CEP70Q8NHQ1 597 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 PIK3R5Q8WYR1 880 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 FAF2Q96CS3 445 aa3.85□□□□□ -1.79
SHPRH-205ENST00000433355 C1orf74Q96LT6 269 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms