RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 RPRD1AQ96P16 312 aaPredicted RBP27.27■■□□□ 1.96
TMEM248-205ENST00000433271 ZYG11BQ9C0D3 744 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 TRPV4Q9HBA0 871 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 R3HDM2Q9Y2K5 976 aaKnown RBP27.27■■□□□ 1.96
TMEM248-205ENST00000433271 SCAMP3O14828 347 aaKnown RBP27.27■■□□□ 1.96
TMEM248-205ENST00000433271 SLU7O95391 586 aaKnown RBP27.27■■□□□ 1.96
TMEM248-205ENST00000433271 FOSL2P15408 326 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 RHOQP17081 205 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 CCDC85BQ15834 202 aaPredicted RBP27.27■■□□□ 1.96
TMEM248-205ENST00000433271 CCNG2Q16589 344 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 CYP1B1Q16678 543 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 P3H4Q92791 437 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 FRMD8P1Q9BZ68 369 aaPredicted RBP27.27■■□□□ 1.96
TMEM248-205ENST00000433271 MPP6Q9NZW5 540 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 SAE1Q9UBE0 346 aaPredicted RBP27.27■■□□□ 1.96
TMEM248-205ENST00000433271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.26■■□□□ 1.95
TMEM248-205ENST00000433271 WASH4PA8MWX3 477 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 CHKAP35790 457 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 NR2C2P49116 596 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 PAFAH1B3Q15102 231 aaKnown RBP27.26■■□□□ 1.95
TMEM248-205ENST00000433271 RABGAP1LQ5R372 815 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 C1orf228Q6PIY5 440 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 CPXM2Q8N436 756 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 ACTL9Q8TC94 416 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 C1orf54Q8WWF1 131 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 SUSD6Q92537 303 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 MYEOVQ96EZ4 313 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 POMKQ9H5K3 350 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 RETREG1Q9H6L5 497 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 DONSONQ9NYP3 566 aa27.26■■□□□ 1.95
TMEM248-205ENST00000433271 NUP210Q8TEM1 1887 aaPredicted RBP27.25■■□□□ 1.95
TMEM248-205ENST00000433271 PECAM1P16284 738 aaPredicted RBP27.25■■□□□ 1.95
TMEM248-205ENST00000433271 C2orf54Q08AI8 447 aa27.25■■□□□ 1.95
TMEM248-205ENST00000433271 NLRP14Q86W24 1093 aa27.25■■□□□ 1.95
TMEM248-205ENST00000433271 RTL3Q8N8U3 475 aaKnown RBP27.25■■□□□ 1.95
TMEM248-205ENST00000433271 C12orf50Q8NA57 414 aaPredicted RBP27.25■■□□□ 1.95
TMEM248-205ENST00000433271 HAUS1Q96CS2 278 aa27.25■■□□□ 1.95
TMEM248-205ENST00000433271 LRRC19Q9H756 370 aa27.25■■□□□ 1.95
TMEM248-205ENST00000433271 TBC1D14Q9P2M4 693 aa27.25■■□□□ 1.95
TMEM248-205ENST00000433271 MFHAS1Q9Y4C4 1052 aa27.25■■□□□ 1.95
TMEM248-205ENST00000433271 USP15Q9Y4E8 981 aaPredicted RBP27.25■■□□□ 1.95
TMEM248-205ENST00000433271 HEY1Q9Y5J3 304 aa27.25■■□□□ 1.95
TMEM248-205ENST00000433271 ZFP37Q9Y6Q3 630 aaPredicted RBP27.25■■□□□ 1.95
TMEM248-205ENST00000433271 H3BQ06 376 aaPredicted RBP27.24■■□□□ 1.95
TMEM248-205ENST00000433271 GFRA2O00451 464 aa27.24■■□□□ 1.95
TMEM248-205ENST00000433271 IRAK1P51617 712 aa27.24■■□□□ 1.95
TMEM248-205ENST00000433271 OTUD4Q01804 1114 aaKnown RBP27.24■■□□□ 1.95
TMEM248-205ENST00000433271 ATG4AQ8WYN0 398 aa27.24■■□□□ 1.95
TMEM248-205ENST00000433271 MAGOHBQ96A72 148 aaKnown RBP27.24■■□□□ 1.95
TMEM248-205ENST00000433271 PRICKLE1Q96MT3 831 aaPredicted RBP27.24■■□□□ 1.95
TMEM248-205ENST00000433271 MYADMQ96S97 322 aa27.24■■□□□ 1.95
TMEM248-205ENST00000433271 UBE2ZQ9H832 354 aaPredicted RBP27.24■■□□□ 1.95
TMEM248-205ENST00000433271 TMEM248Q9NWD8 314 aa27.24■■□□□ 1.95
TMEM248-205ENST00000433271 OBP2AQ9NY56 170 aa27.24■■□□□ 1.95
TMEM248-205ENST00000433271 TRDMT1O14717 391 aaKnown RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 PHF2O75151 1096 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 VIPR2P41587 438 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 GBE1Q04446 702 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 ALFQ53S48 1182 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 TTC39BQ5VTQ0 682 aaPredicted RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 NPNTQ6UXI9 565 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 CFAP52Q8N1V2 620 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 LZTR1Q8N653 840 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 LRRN4CLQ8ND94 238 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 CNTN5O94779 1100 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 LAMP2P13473 410 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 SERPINB6P35237 376 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 RPS24P62847 133 aaKnown RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 SLC10A2Q12908 348 aaPredicted RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 NOMO1Q15155 1222 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 SKIV2LQ15477 1246 aaKnown RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 DRICH1Q6PGQ1 229 aaPredicted RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 BZW1Q7L1Q6 419 aaKnown RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 OTUB2Q96DC9 234 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 RSPRY1Q96DX4 576 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 TMA16Q96EY4 203 aaKnown RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 LRRC3BQ96PB8 259 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 FAM118BQ9BPY3 351 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 DDX47Q9H0S4 455 aaKnown RBP27.23■■□□□ 1.95
TMEM248-205ENST00000433271 DTLQ9NZJ0 730 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 RAD54BQ9Y620 910 aa27.23■■□□□ 1.95
TMEM248-205ENST00000433271 SLC9A3R1O14745 358 aaPredicted RBP27.22■■□□□ 1.95
TMEM248-205ENST00000433271 LIASO43766 372 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 TSPAN3O60637 253 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 KCNA5P22460 613 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 CHRNA3P32297 505 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 GBP2P32456 591 aaPredicted RBP27.22■■□□□ 1.95
TMEM248-205ENST00000433271 SLC35B2Q8TB61 432 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 E2F7Q96AV8 911 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 KLC2Q9H0B6 622 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 ZNF212Q9UDV6 495 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 DOCK4Q8N1I0 1966 aa27.22■■□□□ 1.95
TMEM248-205ENST00000433271 MFSD11O43934 449 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 FCARP24071 287 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 CDH4P55283 916 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 CHST9Q7L1S5 443 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 TFAP2DQ7Z6R9 452 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 KLHL7Q8IXQ5 586 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 MMGT1Q8N4V1 131 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 NPWQ8N729 165 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms