RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CPA5Q8WXQ8 436 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 PPP1R13BQ96KQ4 1090 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 CIPCQ9C0C6 399 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 GRPEL1Q9HAV7 217 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 STIM2Q9P246 746 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 CEP83Q9Y592 693 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 MAP1BP46821 2468 aaKnown RBP17.56■□□□□ 0.4
UBE3D-204ENST00000430071 MOCS2O96007 188 aaPredicted RBP17.56■□□□□ 0.4
UBE3D-204ENST00000430071 PLEKP08567 350 aaPredicted RBP17.56■□□□□ 0.4
UBE3D-204ENST00000430071 SDHBP21912 280 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 CDC25BP30305 580 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 ACADSBP45954 432 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 RPS24P62847 133 aaKnown RBP17.56■□□□□ 0.4
UBE3D-204ENST00000430071 RING1Q06587 406 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 CLEC16AQ2KHT3 1053 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 RNF43Q68DV7 783 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 KIAA1324Q6UXG2 1013 aaKnown RBP17.56■□□□□ 0.4
UBE3D-204ENST00000430071 TRIM72Q6ZMU5 477 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 CHST9Q7L1S5 443 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 LPCAT2Q7L5N7 544 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 KIAA0907Q7Z7F0 614 aaPredicted RBP17.56■□□□□ 0.4
UBE3D-204ENST00000430071 ADIPOR2Q86V24 386 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 CACUL1Q86Y37 369 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 LMLNQ96KR4 655 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 SPACA7Q96KW9 195 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 EDEM2Q9BV94 578 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 SLC2A11Q9BYW1 496 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 ABHD10Q9NUJ1 306 aa17.56■□□□□ 0.4
UBE3D-204ENST00000430071 AKR1B15C9JRZ8 316 aaPredicted RBP17.55■□□□□ 0.4
UBE3D-204ENST00000430071 GRAP2O75791 330 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 LATS1O95835 1130 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 ERBB2P04626 1255 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 SERPING1P05155 500 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 TPM1P09493 284 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 UNGP13051 313 aaPredicted RBP17.55■□□□□ 0.4
UBE3D-204ENST00000430071 COPAP53621 1224 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 LIMK1P53667 647 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 RPL6Q02878 288 aaKnown RBP17.55■□□□□ 0.4
UBE3D-204ENST00000430071 ZC3H12AQ5D1E8 599 aaKnown RBP17.55■□□□□ 0.4
UBE3D-204ENST00000430071 PPM1JQ5JR12 505 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 MMS22LQ6ZRQ5 1243 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 C11orf74Q86VG3 221 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 CFAP52Q8N1V2 620 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 TC2NQ8N9U0 490 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 SLC30A5Q8TAD4 765 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 NOX5Q96PH1 765 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 MTG2Q9H4K7 406 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 SEPT11Q9NVA2 429 aaKnown RBP17.55■□□□□ 0.4
UBE3D-204ENST00000430071 ARHGAP20Q9P2F6 1191 aa17.55■□□□□ 0.4
UBE3D-204ENST00000430071 C4orf47A7E2U8 309 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 DDX3XO00571 662 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBE3D-204ENST00000430071 CDX4O14627 284 aaPredicted RBP17.54■□□□□ 0.4
UBE3D-204ENST00000430071 IGLV3-25P01717 112 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 PABPC1P11940 636 aaKnown RBP17.54■□□□□ 0.4
UBE3D-204ENST00000430071 TNFAIP3P21580 790 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 KCNA4P22459 653 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 NUMBP49757 651 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 EIF4EBP2Q13542 120 aaPredicted RBP17.54■□□□□ 0.4
UBE3D-204ENST00000430071 PTPRNQ16849 979 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 C2CD6Q53TS8 623 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 TDRD12Q587J7 1177 aaKnown RBP17.54■□□□□ 0.4
UBE3D-204ENST00000430071 FSCBQ5H9T9 825 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 NUGGCQ68CJ6 796 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 FAM183BPQ6ZVS7 135 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 ERICH1Q86X53 443 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 CNGA4Q8IV77 575 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 UNC45BQ8IWX7 931 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 DEFB106AQ8N104 65 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 UCMAQ8WVF2 138 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 GOLGA1Q92805 767 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 ADAM33Q9BZ11 813 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 GGA2Q9UJY4 613 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 INTS6Q9UL03 887 aaKnown RBP17.54■□□□□ 0.4
UBE3D-204ENST00000430071 TLR6Q9Y2C9 796 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 PLXNA2O75051 1894 aa17.54■□□□□ 0.4
UBE3D-204ENST00000430071 IRAK2O43187 625 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 TRUB2O95900 331 aaKnown RBP17.53■□□□□ 0.4
UBE3D-204ENST00000430071 GABRB2P47870 512 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 SLC11A2P49281 568 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 YWHAZP63104 245 aaKnown RBP17.53■□□□□ 0.4
UBE3D-204ENST00000430071 CENPCQ03188 943 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 LYSMD4Q5XG99 296 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 RAP1GAP2Q684P5 730 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 MBLAC2Q68D91 279 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 DRC7Q8IY82 874 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.53■□□□□ 0.4
UBE3D-204ENST00000430071 AZIN2Q96A70 460 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 SERPINB11Q96P15 392 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 PRDM16Q9HAZ2 1276 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 POPDC2Q9HBU9 364 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 TAS2R14Q9NYV8 317 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 PILRBQ9UKJ0 227 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 BZW2Q9Y6E2 419 aaKnown RBP17.53■□□□□ 0.4
UBE3D-204ENST00000430071 SYNJ2BP-COX16A0A087WUM0 186 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 CAPN9O14815 690 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 KHNYNO15037 678 aaKnown RBP17.53■□□□□ 0.4
UBE3D-204ENST00000430071 FOXD2O60548 495 aaPredicted RBP17.53■□□□□ 0.4
UBE3D-204ENST00000430071 EPHX1P07099 455 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 MMP8P22894 467 aa17.53■□□□□ 0.4
UBE3D-204ENST00000430071 MAOBP27338 520 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms