RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 PDCLQ13371 301 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 MEA1Q16626 185 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 FSCBQ5H9T9 825 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 DHX40Q8IX18 779 aaKnown RBP17.69■□□□□ 0.42
TRIM39-209ENST00000428728 STK32AQ8WU08 396 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 MYO19Q96H55 970 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 TMEM121BQ9BXQ6 578 aaPredicted RBP17.69■□□□□ 0.42
TRIM39-209ENST00000428728 BTBD1Q9H0C5 482 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 PCED1AQ9H1Q7 454 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 GAREM1Q9H706 876 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 POPDC2Q9HBU9 364 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 COX16Q9P0S2 106 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 APEX2Q9UBZ4 518 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 SUN2Q9UH99 717 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.69■□□□□ 0.42
TRIM39-209ENST00000428728 CEP83Q9Y592 693 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 PCDHB9Q9Y5E1 797 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 CEP295Q9C0D2 2601 aa17.69■□□□□ 0.42
TRIM39-209ENST00000428728 A0A1B0GVT2 93 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 H0Y626 953 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 SIN3BO75182 1162 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 FSBPO95073 299 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 CER1O95813 267 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 ASLP04424 464 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 TACR2P21452 398 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 MATKP42679 507 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 CTSOP43234 321 aaPredicted RBP17.68■□□□□ 0.42
TRIM39-209ENST00000428728 UBE2HP62256 183 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 BNC1Q01954 994 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 TAF5Q15542 800 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 PITRM1Q5JRX3 1037 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 LAYNQ6UX15 382 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 GBP6Q6ZN66 633 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 CIR1Q86X95 450 aaPredicted RBP17.68■□□□□ 0.42
TRIM39-209ENST00000428728 GANCQ8TET4 914 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 GATA6Q92908 595 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 TTC17Q96AE7 1141 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 MED15Q96RN5 788 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 THAP9Q9H5L6 903 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 FAM204AQ9H8W3 233 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 ZMIZ1Q9ULJ6 1067 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 FNDC3AQ9Y2H6 1198 aaKnown RBP17.68■□□□□ 0.42
TRIM39-209ENST00000428728 PLXNB3Q9ULL4 1909 aa17.68■□□□□ 0.42
TRIM39-209ENST00000428728 DOCK9Q9BZ29 2069 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 MTIF2P46199 727 aaKnown RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 CSNK1EP49674 416 aaKnown RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 YWHAZP63104 245 aaKnown RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 ZBTB16Q05516 673 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 HNRNPDQ14103 355 aaKnown RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 TRIP6Q15654 476 aaKnown RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 TPD52L1Q16890 204 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 EXOC3L4Q17RC7 722 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 HNRNPA1L2Q32P51 320 aaKnown RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 BEND5Q7L4P6 421 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 TMEM110Q86TL2 294 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 CHCHD4Q8N4Q1 142 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 C1orf216Q8TAB5 229 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 SETD7Q8WTS6 366 aaKnown RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 BIRC7Q96CA5 298 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 BTN2A3PQ96KV6 586 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 MRGPRX3Q96LB0 322 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 FAM81BQ96LP2 452 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 CPXM1Q96SM3 734 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 RSPH9Q9H1X1 276 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 AJAP1Q9UKB5 411 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-209ENST00000428728 ERVW-1Q9UQF0 538 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 NEUROG3Q9Y4Z2 214 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 KNL1Q8NG31 2342 aa17.67■□□□□ 0.42
TRIM39-209ENST00000428728 FAM47DPA6NHR8 397 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 TTC34A8MYJ7 566 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 F5H5T6 163 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 GRAP2O75791 330 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 MOCS3O95396 460 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 IGLV3-25P01717 112 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 RDXP35241 583 aaKnown RBP17.66■□□□□ 0.42
TRIM39-209ENST00000428728 AFF3P51826 1226 aaKnown RBP17.66■□□□□ 0.42
TRIM39-209ENST00000428728 HLA-BQ31612 363 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 RNF219Q5W0B1 726 aaPredicted RBP17.66■□□□□ 0.42
TRIM39-209ENST00000428728 IL27RAQ6UWB1 636 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 APCDD1Q8J025 514 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 ATP6V0D2Q8N8Y2 350 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 C1orf131Q8NDD1 294 aaKnown RBP17.66■□□□□ 0.42
TRIM39-209ENST00000428728 ZCCHC14Q8WYQ9 949 aaKnown RBP17.66■□□□□ 0.42
TRIM39-209ENST00000428728 SHC3Q92529 594 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 PABPC3Q9H361 631 aaKnown RBP17.66■□□□□ 0.42
TRIM39-209ENST00000428728 SGK2Q9HBY8 427 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 TM9SF3Q9HD45 589 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 TM7SF3Q9NS93 570 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 DDIT4Q9NX09 232 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 KIAA1522Q9P206 1035 aaPredicted RBP17.66■□□□□ 0.42
TRIM39-209ENST00000428728 SERGEFQ9UGK8 458 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 CABIN1Q9Y6J0 2220 aa17.66■□□□□ 0.42
TRIM39-209ENST00000428728 IGF2RP11717 2491 aa17.65■□□□□ 0.42
TRIM39-209ENST00000428728 A0A1W2PP55 124 aa17.65■□□□□ 0.42
TRIM39-209ENST00000428728 MID1O15344 667 aa17.65■□□□□ 0.42
TRIM39-209ENST00000428728 RNASEH1O60930 286 aaKnown RBP17.65■□□□□ 0.42
TRIM39-209ENST00000428728 TRIM16O95361 564 aa17.65■□□□□ 0.42
TRIM39-209ENST00000428728 FTH1P19P0C7X4 201 aa17.65■□□□□ 0.42
TRIM39-209ENST00000428728 PNMA6AP0CW24 399 aaPredicted RBP17.65■□□□□ 0.42
TRIM39-209ENST00000428728 C7P10643 843 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms