RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PPIL2Q13356 520 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 UAP1L1Q3KQV9 507 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 IFIT1BQ5T764 474 aaKnown RBP6.19□□□□□ -1.42
C9orf3-205ENST00000427193 TEDDM1Q5T9Z0 273 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 TAF2Q6P1X5 1199 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 TMTC3Q6ZXV5 915 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 ZNF551Q7Z340 670 aaPredicted RBP6.19□□□□□ -1.42
C9orf3-205ENST00000427193 Q8N9P0 234 aaPredicted RBP6.19□□□□□ -1.42
C9orf3-205ENST00000427193 SMOC2Q9H3U7 446 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 VCPKMTQ9H867 229 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 ADAMTS5Q9UNA0 930 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 POLHQ9Y253 713 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 WDFY4Q6ZS81 3184 aa6.19□□□□□ -1.42
C9orf3-205ENST00000427193 PHIPQ8WWQ0 1821 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 TARM1B6A8C7 271 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 F5H6K3 240 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 CXCL11O14625 94 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 GABRDO14764 452 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 ZBTB43O43298 467 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 NDUFB10O96000 172 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 CALM1P0DP23 149 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 CALM2P0DP24 149 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 CALM3P0DP25 149 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 ANP32AP39687 249 aaKnown RBP6.18□□□□□ -1.42
C9orf3-205ENST00000427193 MRPS5P82675 430 aaKnown RBP6.18□□□□□ -1.42
C9orf3-205ENST00000427193 PPATQ06203 517 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 KLRC3Q07444 240 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 ITKQ08881 620 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 EIF2B5Q13144 721 aaKnown RBP6.18□□□□□ -1.42
C9orf3-205ENST00000427193 MTMR1Q13613 665 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 PCBP2Q15366 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
C9orf3-205ENST00000427193 SHHQ15465 462 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 LRRC26Q2I0M4 334 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 RBM20Q5T481 1227 aaKnown RBP6.18□□□□□ -1.42
C9orf3-205ENST00000427193 CATIPQ7Z7H3 387 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 FAM109AQ8N4B1 249 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 SRBD1Q8N5C6 995 aaKnown RBP6.18□□□□□ -1.42
C9orf3-205ENST00000427193 NECAB1Q8N987 351 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 C3orf20Q8ND61 904 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 ATRIPQ8WXE1 791 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 LPAR1Q92633 364 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 FAM136AQ96C01 138 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 PARK7Q99497 189 aaKnown RBP6.18□□□□□ -1.42
C9orf3-205ENST00000427193 LBHD1Q9BQE6 289 aaPredicted RBP6.18□□□□□ -1.42
C9orf3-205ENST00000427193 SPZ1Q9BXG8 430 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 CLIP2Q9UDT6 1046 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 SERGEFQ9UGK8 458 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 STX8Q9UNK0 236 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 STK36Q9NRP7 1315 aa6.18□□□□□ -1.42
C9orf3-205ENST00000427193 CCDC196A0A1B0GTZ2 297 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 ERICH2A1L162 156 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 CCDC69A6NI79 296 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 C19orf81C9J6K1 198 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 PRPF3O43395 683 aaKnown RBP6.17□□□□□ -1.42
C9orf3-205ENST00000427193 JAK2O60674 1132 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 PLEKHA8P1O95397 391 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 RARBP10826 455 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 RXRAP19793 462 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 CD6P30203 668 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 HOXA7P31268 230 aaPredicted RBP6.17□□□□□ -1.42
C9orf3-205ENST00000427193 PIK3CGP48736 1102 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 METAP2P50579 478 aaKnown RBP eCLIP6.17□□□□□ -1.42
C9orf3-205ENST00000427193 GUCY2FP51841 1108 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 SPP2Q13103 211 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 BECN1Q14457 450 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 NPY5RQ15761 445 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 TBCCQ15814 346 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 ASPRV1Q53RT3 343 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 MTX3Q5HYI7 312 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 TMEM31Q5JXX7 168 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 C9orf50Q5SZB4 431 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 GPATCH4Q5T3I0 446 aaKnown RBP6.17□□□□□ -1.42
C9orf3-205ENST00000427193 ZNF782Q6ZMW2 699 aaPredicted RBP6.17□□□□□ -1.42
C9orf3-205ENST00000427193 BHLHA9Q7RTU4 235 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 MICU3Q86XE3 530 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 CCDC83Q8IWF9 413 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 HSCBQ8IWL3 235 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 FAM177A1Q8N128 213 aaPredicted RBP6.17□□□□□ -1.42
C9orf3-205ENST00000427193 LZTS2Q9BRK4 669 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 RNF26Q9BY78 433 aaPredicted RBP6.17□□□□□ -1.42
C9orf3-205ENST00000427193 EPHX3Q9H6B9 360 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 KAT14Q9H8E8 782 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 JMJD4Q9H9V9 463 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 RBM28Q9NW13 759 aaKnown RBP6.17□□□□□ -1.42
C9orf3-205ENST00000427193 THEGQ9P2T0 379 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 ZHX2Q9Y6X8 837 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 SPTBN4Q9H254 2564 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 CACNA1GO43497 2377 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 DOCK1Q14185 1865 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 RLFQ13129 1914 aa6.17□□□□□ -1.42
C9orf3-205ENST00000427193 CACNA1BQ00975 2339 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 C5orf42Q9H799 3197 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 PRSS29PA6NIE9 313 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 KLRF2D3W0D1 207 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 MPHOSPH10O00566 681 aaKnown RBP6.16□□□□□ -1.42
C9orf3-205ENST00000427193 TNPO2O14787 897 aaKnown RBP6.16□□□□□ -1.42
C9orf3-205ENST00000427193 WDR46O15213 610 aaKnown RBP6.16□□□□□ -1.42
C9orf3-205ENST00000427193 DHX16O60231 1041 aaKnown RBP6.16□□□□□ -1.42
C9orf3-205ENST00000427193 LATS1O95835 1130 aa6.16□□□□□ -1.42
C9orf3-205ENST00000427193 PRR35P0CG20 571 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms