RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 KRT71Q3SY84 523 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ANKRD20A2Q5SQ80 823 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ANKRD20A1Q5TYW2 823 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 EMC10Q5UCC4 262 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ANKRD20A3Q5VUR7 823 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 PPP1R21Q6ZMI0 780 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 PDIK1LQ8N165 341 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 MCUQ8NE86 351 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 PHOSPHO2Q8TCD6 241 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 HERVK_113Q902F9 699 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 EXOC4Q96A65 974 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 PGM2Q96G03 612 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 C9orf72Q96LT7 481 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ETNK1Q9HBU6 452 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 LRRC4CQ9HCJ2 640 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 PPARGC1AQ9UBK2 798 aaKnown RBP15.64■□□□□ 0.09
ACTB-204ENST00000425660 ADAM21Q9UKJ8 722 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 MAGED2Q9UNF1 606 aaPredicted RBP15.64■□□□□ 0.09
ACTB-204ENST00000425660 ALPK3Q96L96 1907 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 KIAA1671Q9BY89 1806 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 IGLV3-10A0A075B6K4 115 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 GOLGA8MH3BSY2 632 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 RNF103O00237 685 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 STK10O94804 968 aaKnown RBP15.63■□□□□ 0.09
ACTB-204ENST00000425660 MOCS2O96007 188 aaPredicted RBP15.63■□□□□ 0.09
ACTB-204ENST00000425660 TPSB2P20231 275 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 TUBP50607 506 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 GABPB1Q06547 395 aaPredicted RBP15.63■□□□□ 0.09
ACTB-204ENST00000425660 PDIA2Q13087 525 aaKnown RBP15.63■□□□□ 0.09
ACTB-204ENST00000425660 FASTKD3Q14CZ7 662 aaKnown RBP15.63■□□□□ 0.09
ACTB-204ENST00000425660 TPSAB1Q15661 275 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 MSS51Q4VC12 460 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 MS4A13Q5J8X5 152 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 FNBP1LQ5T0N5 605 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 AGBL2Q5U5Z8 902 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 RWDD4Q6NW29 188 aaKnown RBP15.63■□□□□ 0.09
ACTB-204ENST00000425660 MIB1Q86YT6 1006 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 ZBED8Q8IZ13 594 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 ATP6V0D2Q8N8Y2 350 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 NETO2Q8NC67 525 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 CCNYQ8ND76 341 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 AUTS2Q8WXX7 1259 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 RAD9AQ99638 391 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 SLC12A6Q9UHW9 1150 aa15.63■□□□□ 0.09
ACTB-204ENST00000425660 ZMYND8Q9ULU4 1186 aaPredicted RBP15.63■□□□□ 0.09
ACTB-204ENST00000425660 HBS1LQ9Y450 684 aaKnown RBP15.63■□□□□ 0.09
ACTB-204ENST00000425660 DNAJB2P25686 324 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 FDFT1P37268 417 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 PPP3CCP48454 512 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 AFMIDQ63HM1 303 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 ARHGEF18Q6ZSZ5 1173 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 NLRP14Q86W24 1093 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 HERC6Q8IVU3 1022 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 ARHGAP12Q8IWW6 846 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 TNS4Q8IZW8 715 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 TAB3Q8N5C8 712 aaPredicted RBP15.62■□□□□ 0.09
ACTB-204ENST00000425660 RTL3Q8N8U3 475 aaKnown RBP15.62■□□□□ 0.09
ACTB-204ENST00000425660 ZSCAN18Q8TBC5 510 aaPredicted RBP15.62■□□□□ 0.09
ACTB-204ENST00000425660 ZNF512Q96ME7 567 aaPredicted RBP15.62■□□□□ 0.09
ACTB-204ENST00000425660 SERPINB12Q96P63 405 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 TSGA13Q96PP4 275 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 WDR83Q9BRX9 315 aaKnown RBP15.62■□□□□ 0.09
ACTB-204ENST00000425660 IGSF9Q9P2J2 1179 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 DNMT3LQ9UJW3 386 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 NR2E3Q9Y5X4 410 aa15.62■□□□□ 0.09
ACTB-204ENST00000425660 SLC12A8A0AV02 714 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 APRTP07741 180 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 ATP5C1P36542 298 aaKnown RBP15.61■□□□□ 0.09
ACTB-204ENST00000425660 MAGEA3P43357 314 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 GYS2P54840 703 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 CDK16Q00536 496 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 AUHQ13825 339 aaKnown RBP15.61■□□□□ 0.09
ACTB-204ENST00000425660 VEPH1Q14D04 833 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 TNFAIP8L3Q5GJ75 292 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 C6orf118Q5T5N4 469 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 NUGGCQ68CJ6 796 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 KCTD16Q68DU8 428 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 C14orf80Q86SX3 495 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 ZNF567Q8N184 647 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 KLHL23Q8NBE8 558 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 FAM76AQ8TAV0 307 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 VAT1Q99536 393 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 PRMT1Q99873 361 aaKnown RBP15.61■□□□□ 0.09
ACTB-204ENST00000425660 ZBED2Q9BTP6 218 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 EIF2B3Q9NR50 452 aaKnown RBP15.61■□□□□ 0.09
ACTB-204ENST00000425660 INSL5Q9Y5Q6 135 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 IRAK3Q9Y616 596 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 PRRG1O14668 218 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 RASGRF2O14827 1237 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 CNPP09543 421 aaKnown RBP15.61■□□□□ 0.09
ACTB-204ENST00000425660 TSHRP16473 764 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 PTPN3P26045 913 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 ELF1P32519 619 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 TWF1Q12792 350 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 STAT4Q14765 748 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 PARP6Q2NL67 630 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 FAM182AQ5T1J6 154 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 HECTD3Q5T447 861 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 LRRC49Q8IUZ0 686 aa15.61■□□□□ 0.09
ACTB-204ENST00000425660 CCDC13Q8IYE1 715 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms