RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SLC4A5Q9BY07 1137 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 VCX3BQ9H321 246 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 WDR55Q9H6Y2 383 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ITGA11Q9UKX5 1188 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 CAPN8A6NHC0 703 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 GOLGA8TH3BQL2 631 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 DPYSL4O14531 572 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ATP9BO43861 1147 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 CCNT2O60583 730 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 PGM3O95394 542 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 UQCRBP14927 111 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 PGAM1P18669 254 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 RPS12P25398 132 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 PGGT1BP53609 377 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 MSLNQ13421 630 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 SLC9B1Q4ZJI4 515 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 STRA8Q7Z7C7 330 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ICA1LQ8NDH6 482 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 OR52K1Q8NGK4 314 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 TRPM4Q8TD43 1214 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ARNTL2Q8WYA1 636 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF669Q96BR6 464 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 LENG8Q96PV6 779 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 APOL2Q9BQE5 337 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 SNX15Q9NRS6 342 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ETAA1Q9NY74 926 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ARHGAP26Q9UNA1 814 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 HES2Q9Y543 173 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 CCDC160A6NGH7 325 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ZBTB14O43829 449 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 MFSD11O43934 449 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 RTN3O95197 1032 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 POLBP06746 335 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 FDFT1P37268 417 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 GARSP41250 739 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 NIPAL4Q0D2K0 466 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 TMEM62Q0P6H9 643 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 NME3Q13232 169 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 PDK3Q15120 406 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 NXNQ6DKJ4 435 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 LRRC8BQ6P9F7 803 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ARHGAP18Q8N392 663 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 FBXW8Q8N3Y1 598 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ACTRT2Q8TDY3 377 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 NMD3Q96D46 503 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 OR52B2Q96RD2 323 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 AGAP2Q99490 1192 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 SIKE1Q9BRV8 207 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 VRTNQ9H8Y1 702 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 CLIC5Q9NZA1 410 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 INPP5FQ9Y2H2 1132 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ARID2Q68CP9 1835 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 WDR81Q562E7 1941 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 ALDH1A2O94788 518 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 OR6B1O95007 311 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 PRKCGP05129 697 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 GP5P40197 560 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 NUDT2P50583 147 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 SNX16P57768 344 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 IRF9Q00978 393 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 FOLH1Q04609 750 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 KLF10Q13118 480 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 HSP90AA5PQ58FG0 334 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 DCAF6Q58WW2 860 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 FSCBQ5H9T9 825 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 PGM2L1Q6PCE3 622 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 NAPRTQ6XQN6 538 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 SULF1Q8IWU6 871 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 ADAM32Q8TC27 787 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 MAPK15Q8TD08 544 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 PPP1R13LQ8WUF5 828 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 C18orf25Q96B23 403 aaPredicted RBP7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 FCRL3Q96P31 734 aaPredicted RBP7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 FERMT1Q9BQL6 677 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 PRDM12Q9H4Q4 367 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 SNTG2Q9NY99 539 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 KLHL8Q9P2G9 620 aaPredicted RBP7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 MORF4L1Q9UBU8 362 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 SSX2IPQ9Y2D8 614 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 NME7Q9Y5B8 376 aa7.71□□□□□ -1.17
SMARCC1-202ENST00000425518 A0A096LPK6 155 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 NFKBIEO00221 500 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 C22orf31O95567 290 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 CCR10P46092 362 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 SULT1E1P49888 294 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 PITX1P78337 314 aaPredicted RBP7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 KCTD2Q14681 263 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 SATL1Q86VE3 508 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 DEFB106AQ8N104 65 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 CERS2Q96G23 380 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 MPHOSPH6Q99547 160 aaKnown RBP7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 GORASP1Q9BQQ3 440 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 VCX3AQ9NNX9 186 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 DNAJC28Q9NX36 388 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.71□□□□□ -1.187e-7■□□□□ 9
SMARCC1-202ENST00000425518 ERAP1Q9NZ08 941 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 DTNAQ9Y4J8 743 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 CDY2AQ9Y6F7 541 aa7.71□□□□□ -1.18
SMARCC1-202ENST00000425518 CDY1Q9Y6F8 540 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms