RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TRIM65Q6PJ69 517 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 TMEM110Q86TL2 294 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 KDM1BQ8NB78 822 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 ZNF606Q8WXB4 792 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 SNX19Q92543 992 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 MRGPRX3Q96LB0 322 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 RSPH9Q9H1X1 276 aaPredicted RBP18.38■□□□□ 0.53
GPC1-203ENST00000425056 GAREM1Q9H706 876 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 IL21RQ9HBE5 538 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 POPDC2Q9HBU9 364 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 OSGEPQ9NPF4 335 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 XPO7Q9UIA9 1087 aaKnown RBP18.38■□□□□ 0.53
GPC1-203ENST00000425056 FNDC3AQ9Y2H6 1198 aaKnown RBP18.38■□□□□ 0.53
GPC1-203ENST00000425056 SLCO1B1Q9Y6L6 691 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 TP53BP1Q12888 1972 aaPredicted RBP18.37■□□□□ 0.53
GPC1-203ENST00000425056 FREM2Q5SZK8 3169 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 FAM221BA6H8Z2 402 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 CAPN9O14815 690 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 THAP12O43422 761 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 CBFA2T3O75081 653 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 LUC7L3O95232 432 aaKnown RBP18.37■□□□□ 0.53
GPC1-203ENST00000425056 MOCS2O96007 188 aaPredicted RBP18.37■□□□□ 0.53
GPC1-203ENST00000425056 APOEP02649 317 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 GNA15P30679 374 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 ST8SIA6P61647 398 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 PDCLQ13371 301 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 ARID5BQ14865 1188 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 HNRNPA1L2Q32P51 320 aaKnown RBP18.37■□□□□ 0.53
GPC1-203ENST00000425056 DCAF6Q58WW2 860 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 GLRX5Q86SX6 157 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 CARNMT1Q8N4J0 409 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 FAM81BQ96LP2 452 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 SGK2Q9HBY8 427 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 ACP6Q9NPH0 428 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 TM7SF3Q9NS93 570 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 RWDD2AQ9UIY3 292 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 PCOLCE2Q9UKZ9 415 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 SCML1Q9UN30 329 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 PCDHB9Q9Y5E1 797 aa18.37■□□□□ 0.53
GPC1-203ENST00000425056 A0A1B0GVT2 93 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 BECN2A8MW95 431 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 FTH1P19P0C7X4 201 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 GRIA4P48058 902 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 CSNK1EP49674 416 aaKnown RBP18.36■□□□□ 0.53
GPC1-203ENST00000425056 YWHAZP63104 245 aaKnown RBP18.36■□□□□ 0.53
GPC1-203ENST00000425056 EIF4EBP2Q13542 120 aaPredicted RBP18.36■□□□□ 0.53
GPC1-203ENST00000425056 HLA-BQ31612 363 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 FSCBQ5H9T9 825 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 PITRM1Q5JRX3 1037 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 ITIH6Q6UXX5 1313 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 USP30Q70CQ3 517 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 CCDC117Q8IWD4 279 aaPredicted RBP18.36■□□□□ 0.53
GPC1-203ENST00000425056 CFAP52Q8N1V2 620 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 CHCHD4Q8N4Q1 142 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 KNL1Q8NG31 2342 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 ZCCHC14Q8WYQ9 949 aaKnown RBP18.36■□□□□ 0.53
GPC1-203ENST00000425056 BIRC7Q96CA5 298 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 BTN2A3PQ96KV6 586 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 MED15Q96RN5 788 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 PABPC3Q9H361 631 aaKnown RBP18.36■□□□□ 0.53
GPC1-203ENST00000425056 MTG2Q9H4K7 406 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 THAP9Q9H5L6 903 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 TM9SF3Q9HD45 589 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 PCDHGB2Q9Y5G2 931 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 DMXL2Q8TDJ6 3036 aa18.36■□□□□ 0.53
GPC1-203ENST00000425056 PLXNA2O75051 1894 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 SIN3BO75182 1162 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 TRUB2O95900 331 aaKnown RBP18.35■□□□□ 0.53
GPC1-203ENST00000425056 SRPRAP08240 638 aaKnown RBP18.35■□□□□ 0.53
GPC1-203ENST00000425056 TACR2P21452 398 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 PITX1P78337 314 aaPredicted RBP18.35■□□□□ 0.53
GPC1-203ENST00000425056 ZC3H12AQ5D1E8 599 aaKnown RBP18.35■□□□□ 0.53
GPC1-203ENST00000425056 RAP1GAP2Q684P5 730 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 GJB7Q6PEY0 223 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 DBX2Q6ZNG2 339 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 MMS22LQ6ZRQ5 1243 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 CHSY1Q86X52 802 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 LGI2Q8N0V4 545 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 BAHD1Q8TBE0 780 aaPredicted RBP18.35■□□□□ 0.53
GPC1-203ENST00000425056 ADAMTS14Q8WXS8 1223 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 CRACR2AQ9BSW2 395 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 KIAA1468Q9P260 1216 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 APEX2Q9UBZ4 518 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 TJP2Q9UDY2 1190 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 ERVW-1Q9UQF0 538 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 FAM208BQ5VWN6 2430 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 CABIN1Q9Y6J0 2220 aa18.35■□□□□ 0.53
GPC1-203ENST00000425056 GTPBP10A4D1E9 387 aaKnown RBP18.34■□□□□ 0.53
GPC1-203ENST00000425056 FLRT2O43155 660 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 MOCS3O95396 460 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 CD27P26842 260 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 TEAD4Q15561 434 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 CST6Q15828 149 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 C9orf64Q5T6V5 341 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 SMYD5Q6GMV2 418 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 DHX40Q8IX18 779 aaKnown RBP18.34■□□□□ 0.53
GPC1-203ENST00000425056 SHC3Q92529 594 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 ORAI3Q9BRQ5 295 aa18.34■□□□□ 0.53
GPC1-203ENST00000425056 KIAA1522Q9P206 1035 aaPredicted RBP18.34■□□□□ 0.53
GPC1-203ENST00000425056 SERGEFQ9UGK8 458 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms