RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 M0QZQ0 153 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 SPRY3O43610 288 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 LDB3O75112 727 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 MST1P26927 711 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 DSC1Q08554 894 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 PPP2R5AQ15172 486 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 SHBQ15464 509 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 KIAA0408Q6ZU52 694 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 RAVER1Q8IY67 606 aaKnown RBP5.34□□□□□ -1.55
LINC01040-201ENST00000425048 NCKIPSDQ9NZQ3 722 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 OR2W5A6NFC9 320 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 CNTN5O94779 1100 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 SCGB1D2O95969 90 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 IDEP14735 1019 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 ARSBP15848 533 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 GPS2Q13227 327 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 NFE2Q16621 373 aaPredicted RBP5.33□□□□□ -1.56
LINC01040-201ENST00000425048 ODR4Q5SWX8 454 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 OTUD1Q5VV17 481 aaPredicted RBP5.33□□□□□ -1.56
LINC01040-201ENST00000425048 PRSS57Q6UWY2 283 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 C16orf89Q6UX73 402 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 FAM83HQ6ZRV2 1179 aaPredicted RBP5.33□□□□□ -1.56
LINC01040-201ENST00000425048 KRT27Q7Z3Y8 459 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 FBXO28Q9NVF7 368 aa5.33□□□□□ -1.56
LINC01040-201ENST00000425048 ZMYND8Q9ULU4 1186 aaPredicted RBP5.33□□□□□ -1.56
LINC01040-201ENST00000425048 FRMPD2Q68DX3 1309 aaPredicted RBP5.32□□□□□ -1.56
LINC01040-201ENST00000425048 A0A1B0GUV1 79 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 DENND3A2RUS2 1198 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 RGS14O43566 566 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 GLUD1P00367 558 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 VIPP01282 170 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 PRSS2P07478 247 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 GLUD2P49448 558 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 SLC37A1P57057 533 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 PMPCAQ10713 525 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 GPR18Q14330 331 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 GRM3Q14832 879 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 RAP1GAP2Q684P5 730 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 SPSB3Q6PJ21 355 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 KDELC2Q7Z4H8 507 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 ADPRHL1Q8NDY3 354 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 GABPB2Q8TAK5 448 aaPredicted RBP5.32□□□□□ -1.56
LINC01040-201ENST00000425048 KAT2AQ92830 837 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 ZNF556Q9HAH1 456 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.32□□□□□ -1.56
LINC01040-201ENST00000425048 FZD10Q9ULW2 581 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 G3BP2Q9UN86 482 aaKnown RBP5.32□□□□□ -1.56
LINC01040-201ENST00000425048 PCDHB7Q9Y5E2 793 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 PCDHGB6Q9Y5F9 930 aa5.32□□□□□ -1.56
LINC01040-201ENST00000425048 LCKP06239 509 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 MYL4P12829 197 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 RHCEP18577 417 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 ABATP80404 500 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 BEND5Q7L4P6 421 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 CADM3Q8N126 398 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 WBP1Q96G27 269 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 SNX27Q96L92 541 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 PCDHAC1Q9H158 963 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 SFXN1Q9H9B4 322 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 TNFSF13BQ9Y275 285 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 UBE2J1Q9Y385 318 aaPredicted RBP5.31□□□□□ -1.56
LINC01040-201ENST00000425048 LMTK3Q96Q04 1460 aa5.31□□□□□ -1.56
LINC01040-201ENST00000425048 GOLGA6CA6NDK9 693 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 GOLGA6BA6NDN3 693 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 RHPN2P1A8MT19 583 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 NPC1O15118 1278 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 KAT7O95251 611 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 LCATP04180 440 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 GOLGA6DP0CG33 693 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 HILS1P60008 231 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 ERVFC1-1P60608 527 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 GBX1Q14549 363 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 DNTTIP2Q5QJE6 756 aaKnown RBP5.3□□□□□ -1.56
LINC01040-201ENST00000425048 FNBP1LQ5T0N5 605 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 OTUD3Q5T2D3 398 aaPredicted RBP5.3□□□□□ -1.56
LINC01040-201ENST00000425048 C10orf76Q5T2E6 689 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 WDR93Q6P2C0 686 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 TTC30AQ86WT1 665 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 APOL5Q9BWW9 433 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 MAGEH1Q9H213 219 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 IL21RQ9HBE5 538 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 GOLGA6AQ9NYA3 693 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 CKAP5Q14008 2032 aa5.3□□□□□ -1.56
LINC01040-201ENST00000425048 SRGAP2BP0DMP2 458 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 FGFR2P21802 821 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 TRAF2Q12933 501 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 TRAF1Q13077 416 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 SLC5A9Q2M3M2 681 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 ENTPD8Q5MY95 495 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 KLHDC7AQ5VTJ3 777 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 DCAF12L2Q5VW00 463 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 FBXL22Q6P050 247 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 NPIPB3Q92617 1050 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.29□□□□□ -1.56
LINC01040-201ENST00000425048 CORO2BQ9UQ03 480 aa5.29□□□□□ -1.56
LINC01040-201ENST00000425048 SMTNL1A8MU46 457 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 VSTM5A8MXK1 200 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 NEURL1O76050 574 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 PLGP00747 810 aaPredicted RBP5.28□□□□□ -1.56
LINC01040-201ENST00000425048 RFX5P48382 616 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms