RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 ZSCAN22P10073 491 aaPredicted RBP16.76■□□□□ 0.27
PUDP-203ENST00000424830 ITPKBP27987 946 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 CD38P28907 300 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 EIF2S3P41091 472 aaKnown RBP16.76■□□□□ 0.27
PUDP-203ENST00000424830 GALCP54803 685 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 DNAJC3Q13217 504 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 CST6Q15828 149 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 HNRNPA1L2Q32P51 320 aaKnown RBP16.76■□□□□ 0.27
PUDP-203ENST00000424830 SGO2Q562F6 1265 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 PIK3R6Q5UE93 754 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 NUGGCQ68CJ6 796 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 RFWD3Q6PCD5 774 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 CCDC117Q8IWD4 279 aaPredicted RBP16.76■□□□□ 0.27
PUDP-203ENST00000424830 UNC45BQ8IWX7 931 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 HJURPQ8NCD3 748 aaPredicted RBP16.76■□□□□ 0.27
PUDP-203ENST00000424830 OR2T34Q8NGX1 318 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 WFDC5Q8TCV5 224 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 SAP25Q8TEE9 199 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 SEMA4DQ92854 862 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 TATDN2Q93075 761 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 CNGB3Q9NQW8 809 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 FZD4Q9ULV1 537 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
PUDP-203ENST00000424830 A0A1W2PP55 124 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 CBX4O00257 560 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 MID1O15344 667 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 SIN3BO75182 1162 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 CD19P15391 556 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 PFKFB1P16118 471 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 TARDBPQ13148 414 aaKnown RBP eCLIP16.75■□□□□ 0.27
PUDP-203ENST00000424830 SLC45A4Q5BKX6 768 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 HES3Q5TGS1 186 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
PUDP-203ENST00000424830 EID2Q8N6I1 236 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 FCRL3Q96P31 734 aaPredicted RBP16.75■□□□□ 0.27
PUDP-203ENST00000424830 NRSN2Q9GZP1 204 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 MTG2Q9H4K7 406 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 PRORYQ9H606 182 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 STIM2Q9P246 746 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 SERGEFQ9UGK8 458 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 TPX2Q9ULW0 747 aaKnown RBP16.75■□□□□ 0.27
PUDP-203ENST00000424830 ZNF462Q96JM2 2506 aa16.75■□□□□ 0.27
PUDP-203ENST00000424830 RHOBTB3O94955 611 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 WNT1P04628 370 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 SETSIPP0DME0 302 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 LCP1P13796 627 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 EPHA8P29322 1005 aaPredicted RBP16.74■□□□□ 0.27
PUDP-203ENST00000424830 CSKP41240 450 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 ACADVLP49748 655 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 CLDN6P56747 220 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 YWHAEP62258 255 aaKnown RBP16.74■□□□□ 0.27
PUDP-203ENST00000424830 CDH18Q13634 790 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 MSANTD2Q6P1R3 559 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 MMAAQ8IVH4 418 aaKnown RBP16.74■□□□□ 0.27
PUDP-203ENST00000424830 GUF1Q8N442 669 aaKnown RBP16.74■□□□□ 0.27
PUDP-203ENST00000424830 OXR1Q8N573 874 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 KDM1BQ8NB78 822 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 LSM14AQ8ND56 463 aaKnown RBP16.74■□□□□ 0.27
PUDP-203ENST00000424830 FIBINQ8TAL6 211 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 KCTD13Q8WZ19 329 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 TTC17Q96AE7 1141 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 MYO19Q96H55 970 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 DDX50Q9BQ39 737 aaKnown RBP16.74■□□□□ 0.27
PUDP-203ENST00000424830 NEUROG2Q9H2A3 272 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 ADAMTS1Q9UHI8 967 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 MYLKQ15746 1914 aa16.74■□□□□ 0.27
PUDP-203ENST00000424830 GOLGA6L7A0A1B0GV03 622 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 A0A1B0GVL5 298 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 TARSL2A2RTX5 802 aaKnown RBP16.73■□□□□ 0.27
PUDP-203ENST00000424830 TLX3O43711 291 aaPredicted RBP16.73■□□□□ 0.27
PUDP-203ENST00000424830 ACSL4O60488 711 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 IGLV3-27P01718 113 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 EPB41P11171 864 aaKnown RBP16.73■□□□□ 0.27
PUDP-203ENST00000424830 SLC6A4P31645 630 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 CCR5P51681 352 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 DAOAP59103 153 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 ILKQ13418 452 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 CUL2Q13617 745 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 ARID5BQ14865 1188 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 RTP5Q14D33 572 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 SHBQ15464 509 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 FAM133BQ5BKY9 247 aaKnown RBP16.73■□□□□ 0.27
PUDP-203ENST00000424830 SCML4Q8N228 414 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 CARNMT1Q8N4J0 409 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 UBA3Q8TBC4 463 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 COL26A1Q96A83 441 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 SERAC1Q96JX3 654 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 EBF2Q9HAK2 575 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 RCOR1Q9UKL0 485 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 CEP83Q9Y592 693 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 TENM4Q6N022 2769 aa16.73■□□□□ 0.27
PUDP-203ENST00000424830 NYNRINQ9P2P1 1898 aaKnown RBP16.72■□□□□ 0.27
PUDP-203ENST00000424830 EDDM13A0A1B0GTR0 161 aa16.72■□□□□ 0.27
PUDP-203ENST00000424830 CAPN9O14815 690 aa16.72■□□□□ 0.27
PUDP-203ENST00000424830 C1QL1O75973 258 aa16.72■□□□□ 0.27
PUDP-203ENST00000424830 MOCS3O95396 460 aa16.72■□□□□ 0.27
PUDP-203ENST00000424830 SRPRAP08240 638 aaKnown RBP16.72■□□□□ 0.27
PUDP-203ENST00000424830 VDRP11473 427 aa16.72■□□□□ 0.27
PUDP-203ENST00000424830 CMA1P23946 247 aa16.72■□□□□ 0.27
PUDP-203ENST00000424830 SLC8A1P32418 973 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms