RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 RHOXF2Q9BQY4 288 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 MXD3Q9BW11 206 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 EIF2AQ9BY44 585 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 RSAD1Q9HA92 442 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 SCPEP1Q9HB40 452 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 UBN1Q9NPG3 1134 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 IARS2Q9NSE4 1012 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 RBM12Q9NTZ6 932 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 FOXJ2Q9P0K8 574 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 LRIT1Q9P2V4 623 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 C15orf41Q9Y2V0 281 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 RRP7AQ9Y3A4 280 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 NPC1L1Q9UHC9 1359 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 TNIKQ9UKE5 1360 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 MROH5Q6ZUA9 1318 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 TTC21BQ7Z4L5 1316 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 A0A087WUV0 522 aaPredicted RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 GOLGA6L7A0A1B0GV03 622 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 E2F8A0AVK6 867 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 PMM2O15305 246 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 RIPK2O43353 540 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 BRINP1O60477 761 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 TLR5O60602 858 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 USO1O60763 962 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 RFPL1O75677 317 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ABLIM3O94929 683 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 TRIM16O95361 564 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ADCY5O95622 1261 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 IGLV2-14P01704 120 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ELANEP08246 267 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 CYP2A6P11509 494 aaPredicted RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 CKBP12277 381 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 PHKG2P15735 406 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 CDH3P22223 829 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 FGFR4P22455 802 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 JAK1P23458 1154 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 AXLP30530 894 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 HNRNPH1P31943 449 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 ABCG1P45844 678 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 PLCD1P51178 756 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 RPP38P78345 283 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 ZBTB16Q05516 673 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 NIPAL4Q0D2K0 466 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 GRSF1Q12849 480 aaKnown RBP eCLIP3.03□□□□□ -1.92
PMS1-209ENST00000424059 MTMR1Q13613 665 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 CUL2Q13617 745 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 MXD4Q14582 209 aaPredicted RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 SPCS2Q15005 226 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ZRSR1Q15695 479 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 MOGQ16653 247 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 LETM2Q2VYF4 491 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 Q3ZCU0 254 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 CFAP221Q4G0U5 840 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 PABPC1LQ4VXU2 614 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 CCDC38Q502W7 563 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ZNF362Q5T0B9 420 aaPredicted RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 ITPRIPL1Q6GPH6 555 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 PM20D1Q6GTS8 502 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 RAB12Q6IQ22 244 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 MIS18BP1Q6P0N0 1132 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 KLC3Q6P597 504 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 FOXR2Q6PJQ5 311 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 SLC30A9Q6PML9 568 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 C6orf89Q6UWU4 347 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ZNF704Q6ZNC4 412 aaPredicted RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 MED25Q71SY5 747 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 DNAJB7Q7Z6W7 309 aaPredicted RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 SRRM1Q8IYB3 904 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 CCDC170Q8IYT3 715 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 SLC44A3Q8N4M1 653 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 UBR7Q8N806 425 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 LILRB4Q8NHJ6 448 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 SLC35B2Q8TB61 432 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 CHAC2Q8WUX2 184 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ANKS1AQ92625 1134 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 PEX13Q92968 403 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 NCLNQ969V3 563 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 EAF2Q96CJ1 260 aaPredicted RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 CYFIP2Q96F07 1278 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ATP6V1G3Q96LB4 118 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 CAMKK2Q96RR4 588 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 GAL3ST1Q99999 423 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 MRI1Q9BV20 369 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 STK31Q9BXU1 1019 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 TRIM5Q9C035 493 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ZWILCHQ9H900 591 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 BATF3Q9NR55 127 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 HMGXB4Q9UGU5 601 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 SCOCQ9UIL1 159 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 ZNF180Q9UJW8 692 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 MYO6Q9UM54 1294 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 SCAF8Q9UPN6 1271 aaKnown RBP3.03□□□□□ -1.92
PMS1-209ENST00000424059 EXOC7Q9UPT5 735 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 NUDCQ9Y266 331 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.03□□□□□ -1.926e-6■■□□□ 13.3
PMS1-209ENST00000424059 ATP6V1DQ9Y5K8 247 aa3.03□□□□□ -1.92
PMS1-209ENST00000424059 MAPK8IP3Q9UPT6 1336 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 A0A087X0B3 334 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 IQANK1A0A1B0GTG1 560 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 CCDC151A5D8V7 595 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms