RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF276Q8N554 614 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ATAD1Q8NBU5 361 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 IPMKQ8NFU5 416 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 C10orf82Q8WW14 230 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ZNF419Q96HQ0 510 aaPredicted RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 EBNA1BP2Q99848 306 aaKnown RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 PPARGC1AQ9UBK2 798 aaKnown RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 SMG5Q9UPR3 1016 aaKnown RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 MTF2Q9Y483 593 aaPredicted RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ACTL7AQ9Y615 435 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 A0A0U1RQS6 177 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 TRDMT1O14717 391 aaKnown RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 CHADO15335 359 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 LTFP02788 710 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 ARSAP15289 507 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 ETFBP38117 255 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 UBAP2LQ14157 1087 aaKnown RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 SLC39A12Q504Y0 691 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 ARHGAP17Q68EM7 881 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 TMCO2Q7Z6W1 182 aaPredicted RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 LDB1Q86U70 411 aaPredicted RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 RASSF3Q86WH2 238 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 PLD6Q8N2A8 252 aaKnown RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 HIPK4Q8NE63 616 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 OXNAD1Q96HP4 312 aaPredicted RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 HNRNPABQ99729 332 aaKnown RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 RTP3Q9BQQ7 232 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 NMUR2Q9GZQ4 415 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 PRPF4O43172 522 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 PHGDHO43175 533 aaKnown RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 SNRPAP09012 282 aaKnown RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 ARFIP2P53365 341 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 ATXN3P54252 364 aaPredicted RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 DAOAP59103 153 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 STILQ15468 1287 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 LACTB2Q53H82 288 aaPredicted RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 RNF135Q8IUD6 432 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 KLHL5Q96PQ7 755 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 CYP2S1Q96SQ9 504 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 RNF186Q9NXI6 227 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 ZFATQ9P243 1243 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 GTF2IRD1Q9UHL9 959 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 EFR3BQ9Y2G0 817 aa12.25□□□□□ -0.45
PTPRN-204ENST00000423636 KIAA0100Q14667 2235 aaKnown RBP12.25□□□□□ -0.45
PTPRN-204ENST00000423636 A0A0A0MRY4 1105 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 LOC100653049A0A140TA62 436 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 BCLAF3A2AJT9 711 aaKnown RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 HAS3O00219 553 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 C2CD2LO14523 706 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 KRT34O76011 436 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 SORBS2O94875 1100 aaKnown RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 PIRTP0C851 137 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 NOS2P35228 1153 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 AQP5P55064 265 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 ACAP1Q15027 740 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 N4BP2L1Q5TBK1 243 aaPredicted RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 TTC39BQ5VTQ0 682 aaPredicted RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 TRIM68Q6AZZ1 485 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 RGMBQ6NW40 437 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 SPATA13Q96N96 652 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 NPY6RQ99463 290 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 COLEC11Q9BWP8 271 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 WDR6Q9NNW5 1121 aaKnown RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 DIAPH2O60879 1101 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 KRT37O76014 449 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 C1QAP02745 245 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 PRKCGP05129 697 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 SETSIPP0DME0 302 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 GM2AP17900 193 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 USP4Q13107 963 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 CTBP1Q13363 440 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 XRCC4Q13426 336 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 SEPT6Q14141 434 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 FAM117BQ6P1L5 589 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 APOPT1Q96IL0 206 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 C11orf84Q9BUA3 381 aaPredicted RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 TBC1D10AQ9BXI6 508 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 GDAP2Q9NXN4 497 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 TXNDC16Q9P2K2 825 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 USP3Q9Y6I4 520 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 ALDOAP04075 364 aaKnown RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 HOXD8P13378 290 aaPredicted RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 KCNE1P15382 129 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 PTPN9P43378 593 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 KYAT1Q16773 422 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 FYB2Q5VWT5 728 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 SNX31Q8N9S9 440 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 ARNTL2Q8WYA1 636 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 QKIQ96PU8 341 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 APBA2Q99767 749 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 FAM167BQ9BTA0 163 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 FTHL17Q9BXU8 183 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 NMUR1Q9HB89 426 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 IARS2Q9NSE4 1012 aaKnown RBP12.24□□□□□ -0.45
PTPRN-204ENST00000423636 PNPOQ9NVS9 261 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 VANGL2Q9ULK5 521 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 STAP1Q9ULZ2 295 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 TRPV2Q9Y5S1 764 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 USH1CQ9Y6N9 552 aa12.24□□□□□ -0.45
PTPRN-204ENST00000423636 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms