RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 BIRC7Q96CA5 298 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 CDC6Q99741 560 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 ZSWIM1Q9BR11 485 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 SCML1Q9UN30 329 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 PCDHGB2Q9Y5G2 931 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 MOCS3O95396 460 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 CD27P26842 260 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 CSKP41240 450 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 ACADSBP45954 432 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 CCT8P50990 548 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 RPS24P62847 133 aaKnown RBP16.74■□□□□ 0.27
COL18A1-205ENST00000423214 SFSWAPQ12872 951 aaKnown RBP16.74■□□□□ 0.27
COL18A1-205ENST00000423214 INAVAQ3KP66 663 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 RNF219Q5W0B1 726 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-205ENST00000423214 TTI2Q6NXR4 508 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 LAYNQ6UX15 382 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 TAC4Q86UU9 113 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 DHX40Q8IX18 779 aaKnown RBP16.74■□□□□ 0.27
COL18A1-205ENST00000423214 FIBINQ8TAL6 211 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 ADAM32Q8TC27 787 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 RHBDD1Q8TEB9 315 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 FCRL2Q96LA5 508 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-205ENST00000423214 NUCKS1Q9H1E3 243 aaKnown RBP16.74■□□□□ 0.27
COL18A1-205ENST00000423214 RSPH9Q9H1X1 276 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-205ENST00000423214 PABPC3Q9H361 631 aaKnown RBP16.74■□□□□ 0.27
COL18A1-205ENST00000423214 OSGEPQ9NPF4 335 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 TJP2Q9UDY2 1190 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 ANKRD6Q9Y2G4 727 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 SNX11Q9Y5W9 270 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 SLCO1B1Q9Y6L6 691 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 DOCK9Q9BZ29 2069 aa16.74■□□□□ 0.27
COL18A1-205ENST00000423214 FAM47DPA6NHR8 397 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 GOLGA8CPA6NN73 597 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 MED7O43513 233 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 SIN3BO75182 1162 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 GNA14O95837 355 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 AFPP02771 609 aaKnown RBP16.73■□□□□ 0.27
COL18A1-205ENST00000423214 C7P10643 843 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 SCAPQ12770 1279 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 KCNH2Q12809 1159 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 KIF19Q2TAC6 998 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 HNRNPA1L2Q32P51 320 aaKnown RBP16.73■□□□□ 0.27
COL18A1-205ENST00000423214 KIAA0895LQ68EN5 471 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 USP30Q70CQ3 517 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 CHSY1Q86X52 802 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 PROSER1Q86XN7 944 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 LMO3Q8TAP4 145 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 BAHD1Q8TBE0 780 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-205ENST00000423214 IGSF8Q969P0 613 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 TTC17Q96AE7 1141 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 INTS2Q9H0H0 1204 aaKnown RBP16.73■□□□□ 0.27
COL18A1-205ENST00000423214 MTG2Q9H4K7 406 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 FBXL12Q9NXK8 326 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 LHX6Q9UPM6 363 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 NAALADL1Q9UQQ1 740 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL18A1-205ENST00000423214 APC2O95996 2303 aa16.73■□□□□ 0.27
COL18A1-205ENST00000423214 LUC7L3O95232 432 aaKnown RBP16.72■□□□□ 0.27
COL18A1-205ENST00000423214 GRK6P43250 576 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 C21orf59P57076 290 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 PAK1Q13153 545 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 CST6Q15828 149 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 DCAF6Q58WW2 860 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 MS4A13Q5J8X5 152 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 PITRM1Q5JRX3 1037 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 FOXR2Q6PJQ5 311 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 CCNI2Q6ZMN8 369 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-205ENST00000423214 SLCO6A1Q86UG4 719 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 TRIM59Q8IWR1 403 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 SCUBE3Q8IX30 993 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 LGI2Q8N0V4 545 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 CFAP52Q8N1V2 620 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 EHBP1Q8NDI1 1231 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 MYO19Q96H55 970 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 OMDQ99983 421 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 ACE2Q9BYF1 805 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-205ENST00000423214 CCDC86Q9H6F5 360 aaKnown RBP16.72■□□□□ 0.27
COL18A1-205ENST00000423214 MYLKQ15746 1914 aa16.72■□□□□ 0.27
COL18A1-205ENST00000423214 ATRXP46100 2492 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 EDDM13A0A1B0GTR0 161 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 A0A1W2PP55 124 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 LRRC72A6NJI9 287 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 BIN1O00499 593 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 MID1O15344 667 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 THAP12O43422 761 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 RNASEH2AO75792 299 aaKnown RBP16.71■□□□□ 0.27
COL18A1-205ENST00000423214 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-205ENST00000423214 SRPRAP08240 638 aaKnown RBP16.71■□□□□ 0.27
COL18A1-205ENST00000423214 GNA15P30679 374 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 GPD2P43304 727 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 STX17P56962 302 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 MEA1Q16626 185 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 RAP1GAP2Q684P5 730 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 MMS22LQ6ZRQ5 1243 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 ELOA2Q8IYF1 753 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-205ENST00000423214 KDM1BQ8NB78 822 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 SKA1Q96BD8 255 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 SLC39A13Q96H72 371 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 LMLNQ96KR4 655 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms