RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 B3GALT6Q96L58 329 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 FCRL3Q96P31 734 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 DDX50Q9BQ39 737 aaKnown RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 SYT15Q9BQS2 421 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 CRTAC1Q9NQ79 661 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 NOD1Q9Y239 953 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 PRG3Q9Y2Y8 225 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 UNC80Q8N2C7 3258 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 A0A0A0MRY4 1105 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 PEX11AO75192 247 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 PDE1CQ14123 709 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 CRYMQ14894 314 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 PKDCCQ504Y2 493 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 SLC26A9Q7LBE3 791 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 CCNYL1Q8N7R7 359 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ZNF560Q96MR9 790 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 SPATA13Q96N96 652 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 APBA2Q99767 749 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 OSBPL1AQ9BXW6 950 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 WDCPQ9H6R7 721 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 PLEKHA5Q9HAU0 1116 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 KIAA1257Q9ULG3 409 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 MYO7AQ13402 2215 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ANKRD12Q6UB98 2062 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 PTGESO14684 152 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ENDOD1O94919 500 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ALDOAP04075 364 aaKnown RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 NFKB1P19838 968 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 SOX11P35716 441 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 THPOP40225 353 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ZNF157P51786 506 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 NEK3P51956 506 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 CTBP1Q13363 440 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ACAP1Q15027 740 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ACSBG2Q5FVE4 666 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 RALGPS1Q5JS13 557 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 TEX9Q8N6V9 391 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 RBM15BQ8NDT2 890 aaKnown RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ALKBH8Q96BT7 664 aaKnown RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 XAB2Q9HCS7 855 aaKnown RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 CDY2AQ9Y6F7 541 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 BCLAF3A2AJT9 711 aaKnown RBP13.69□□□□□ -0.22
MCF2L-213ENST00000421756 C17orf102A2RUQ5 167 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 MDM4O15151 490 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 CCDC22O60826 627 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 DPYSL2Q16555 572 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 TAZQ16635 292 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 EFHC1Q5JVL4 640 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 PACS1Q6VY07 963 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 LINC01465Q8N7H1 131 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 EXT2Q93063 718 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 KATNBL1Q9H079 304 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 LRMDAQ9H2I8 198 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 OR12D3Q9UGF7 316 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 STAP1Q9ULZ2 295 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 M0QZ92 97 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 TNPO2O14787 897 aaKnown RBP13.69□□□□□ -0.22
MCF2L-213ENST00000421756 GSC2O15499 205 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 SOAT2O75908 522 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 TCN1P20061 433 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-213ENST00000421756 PLK1P53350 603 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 SNX16P57768 344 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 MAXP61244 160 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 POU5F1BQ06416 359 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 TCHHL1Q5QJ38 904 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-213ENST00000421756 C1orf146Q5VVC0 180 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 PAQR9Q6ZVX9 377 aa13.69□□□□□ -0.22
MCF2L-213ENST00000421756 TSR3Q9UJK0 312 aaKnown RBP13.69□□□□□ -0.22
MCF2L-213ENST00000421756 GOLGA8CPA6NN73 597 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 STRNO43815 780 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 CD4P01730 458 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 ITGA2BP08514 1039 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 CCNB1P14635 433 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 ARSAP15289 507 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 TSPAN8P19075 237 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 CD52P31358 61 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 PGFP49763 221 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 TRIM32Q13049 653 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 SLC25A52Q3SY17 297 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 ATG16L1Q676U5 607 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 USP50Q70EL3 339 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-213ENST00000421756 LDB1Q86U70 411 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-213ENST00000421756 C2orf69Q8N8R5 385 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 BTBD10Q9BSF8 475 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 DUSP16Q9BY84 665 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 YIPF3Q9GZM5 350 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 WDR55Q9H6Y2 383 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-213ENST00000421756 RNPEPL1Q9HAU8 725 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 FZD10Q9ULW2 581 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 MTO1Q9Y2Z2 717 aaKnown RBP13.68□□□□□ -0.22
MCF2L-213ENST00000421756 PARP14Q460N5 1801 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 ITGB1P05556 798 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 ALADP13716 330 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 SERPINB5P36952 375 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 SV2CQ496J9 727 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 PYDC1Q8WXC3 89 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 FERMT1Q9BQL6 677 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms