RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 NRG1Q02297 640 aaPredicted RBP16.21■□□□□ 0.18
DDX55-203ENST00000421670 LLGL1Q15334 1064 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 DHCR24Q15392 516 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 ANO4Q32M45 955 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 ODF2Q5BJF6 829 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 RABGAP1LQ5R372 815 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 DCAF12L1Q5VU92 463 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 LRRC31Q6UY01 552 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 HJURPQ8NCD3 748 aaPredicted RBP16.21■□□□□ 0.18
DDX55-203ENST00000421670 FAM71BQ8TC56 605 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 DDI1Q8WTU0 396 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 TBC1D31Q96DN5 1066 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 BBS2Q9BXC9 721 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 STIM2Q9P246 746 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 JRKLQ9Y4A0 524 aa16.21■□□□□ 0.18
DDX55-203ENST00000421670 IGLV3-10A0A075B6K4 115 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 C19orf67A6NJJ6 358 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 MSNP26038 577 aaKnown RBP16.2■□□□□ 0.18
DDX55-203ENST00000421670 HOXD9P28356 352 aaPredicted RBP16.2■□□□□ 0.18
DDX55-203ENST00000421670 EPHB2P29323 1055 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 ARL4AP40617 200 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 RWDD2BP57060 319 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 ZNF211Q13398 564 aaPredicted RBP16.2■□□□□ 0.18
DDX55-203ENST00000421670 RPS6KA1Q15418 735 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 ALFQ53S48 1182 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 ACBD5Q5T8D3 534 aaPredicted RBP16.2■□□□□ 0.18
DDX55-203ENST00000421670 FYB2Q5VWT5 728 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 AADACL2Q6P093 401 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 MFSD7Q6UXD7 560 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 NYAP1Q6ZVC0 841 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 ANKS1BQ7Z6G8 1248 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 TFAP2DQ7Z6R9 452 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 CCDC50Q8IVM0 306 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 TSC1Q92574 1164 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 TMA16Q96EY4 203 aaKnown RBP16.2■□□□□ 0.18
DDX55-203ENST00000421670 CSPG4P5Q96PW8 444 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 ECT2Q9H8V3 914 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 SHROOM3Q8TF72 1996 aa16.2■□□□□ 0.18
DDX55-203ENST00000421670 NCOR1O75376 2440 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 TYW5A2RUC4 315 aaKnown RBP16.19■□□□□ 0.18
DDX55-203ENST00000421670 H3BRJ5 948 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 ADH1CP00326 375 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 CYBBP04839 570 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 ADH5P11766 374 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 TYRP14679 529 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 IL4RP24394 825 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 HOXC13P31276 330 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 TDGQ13569 410 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 RUNX3Q13761 415 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 PDK2Q15119 407 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 MPPE1Q53F39 396 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 RFX8Q6ZV50 586 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.19■□□□□ 0.18
DDX55-203ENST00000421670 CPA6Q8N4T0 437 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 EXD1Q8NHP7 514 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 NECAB3Q96P71 396 aaPredicted RBP16.19■□□□□ 0.18
DDX55-203ENST00000421670 ZNF670Q9BS34 389 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 ZYG11BQ9C0D3 744 aa16.19■□□□□ 0.18
DDX55-203ENST00000421670 DRGXA6NNA5 263 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 KCNK3O14649 394 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 DAPK3O43293 454 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 ZRANB2O95218 330 aaKnown RBP eCLIP16.18■□□□□ 0.18
DDX55-203ENST00000421670 PENKP01210 267 aaPredicted RBP16.18■□□□□ 0.18
DDX55-203ENST00000421670 PYGMP11217 842 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 CXCR5P32302 372 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 ETF1P62495 437 aaKnown RBP16.18■□□□□ 0.18
DDX55-203ENST00000421670 DPYSQ14117 519 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 C5orf22Q49AR2 442 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 TTC39BQ5VTQ0 682 aaPredicted RBP16.18■□□□□ 0.18
DDX55-203ENST00000421670 SPOCD1Q6ZMY3 1216 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 MAP7D3Q8IWC1 876 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 WFDC5Q8TCV5 224 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 CSGALNACT1Q8TDX6 532 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 RBM41Q96IZ5 413 aaKnown RBP16.18■□□□□ 0.18
DDX55-203ENST00000421670 ARHGEF4Q9NR80 690 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 NDFIP2Q9NV92 336 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 MARK1Q9P0L2 795 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 PPARGC1AQ9UBK2 798 aaKnown RBP16.18■□□□□ 0.18
DDX55-203ENST00000421670 CLEC4EQ9ULY5 219 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 MFHAS1Q9Y4C4 1052 aa16.18■□□□□ 0.18
DDX55-203ENST00000421670 A0A1B0GVM2 712 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 TCAF2A6NFQ2 919 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 KRT10P13645 584 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 AMPD1P23109 780 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 CDKN2BP42772 138 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 SOX9P48436 509 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 GAB4Q2WGN9 574 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 ITPRIPL2Q3MIP1 535 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 ANKRD20A8PQ5CZ79 823 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 SYT10Q6XYQ8 523 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 NLRP14Q86W24 1093 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 C12orf40Q86WS4 652 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 RNF135Q8IUD6 432 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 CARNMT1Q8N4J0 409 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 NAT16Q8N8M0 369 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 PCDH19Q8TAB3 1148 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 CHFRQ96EP1 664 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 CD320Q9NPF0 282 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 ETNK2Q9NVF9 386 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 RCOR3Q9P2K3 495 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms