RNA–Protein interactions for RNA: ENST00000421496.5

GGCX-202, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-202ENST00000421496 RNF43Q68DV7 783 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 MMS22LQ6ZRQ5 1243 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 CHSY1Q86X52 802 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 ANKRD20A12PQ8NF67 263 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 CPA5Q8WXQ8 436 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 C18orf8Q96DM3 657 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 SIPA1Q96FS4 1042 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 LMLNQ96KR4 655 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 PCMTD1Q96MG8 357 aaPredicted RBP11.77□□□□□ -0.53
GGCX-202ENST00000421496 TMEM245Q9H330 911 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 ITM2CQ9NQX7 267 aa11.77□□□□□ -0.53
GGCX-202ENST00000421496 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.53
GGCX-202ENST00000421496 CACNA1EQ15878 2313 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 MED19A0JLT2 244 aaPredicted RBP11.76□□□□□ -0.53
GGCX-202ENST00000421496 SMTNL1A8MU46 457 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 M0QYT0 321 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 EPHB6O15197 1021 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 NDUFS2O75306 463 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 SOX5P35711 763 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 CSKP41240 450 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 MATKP42679 507 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 GABRB2P47870 512 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 COPAP53621 1224 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 UBXN1Q04323 297 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 ZNF33AQ06730 810 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 CDH18Q13634 790 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 NCAPHQ15003 741 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 SYCP1Q15431 976 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 PTPRNQ16849 979 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 LYSMD4Q5XG99 296 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 IL31Q6EBC2 164 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 METTL3Q86U44 580 aaKnown RBP11.76□□□□□ -0.53
GGCX-202ENST00000421496 LUZP1Q86V48 1076 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 CACUL1Q86Y37 369 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 ZDHHC17Q8IUH5 632 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 SYT12Q8IV01 421 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 DHX40Q8IX18 779 aaKnown RBP11.76□□□□□ -0.53
GGCX-202ENST00000421496 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 ZNF557Q8N988 423 aaPredicted RBP11.76□□□□□ -0.53
GGCX-202ENST00000421496 ZNF397Q8NF99 534 aaPredicted RBP11.76□□□□□ -0.53
GGCX-202ENST00000421496 EPS8L1Q8TE68 723 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 SLC20A1Q8WUM9 679 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 PRCCQ92733 491 aaPredicted RBP11.76□□□□□ -0.53
GGCX-202ENST00000421496 TTC17Q96AE7 1141 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 SPAG5Q96R06 1193 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 HSD3B7Q9H2F3 369 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.76□□□□□ -0.53
GGCX-202ENST00000421496 KIAA1522Q9P206 1035 aaPredicted RBP11.76□□□□□ -0.53
GGCX-202ENST00000421496 INTS6Q9UL03 887 aaKnown RBP11.76□□□□□ -0.53
GGCX-202ENST00000421496 SIK3Q9Y2K2 1263 aa11.76□□□□□ -0.53
GGCX-202ENST00000421496 LNP1A1A4G5 178 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 F5H5T6 163 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 GOLGA6L19H0YKK7 550 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 GOLGA8SH3BPF8 625 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 DAB1O75553 588 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 LUC7L3O95232 432 aaKnown RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 ACADMP11310 421 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 ZNF18P17022 549 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 TFE3P19532 575 aaPredicted RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 CD6P30203 668 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 NUMBP49757 651 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 TPMTP51580 245 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 LIMK1P53667 647 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 JAM2P57087 298 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 NOMO3P69849 1222 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 CAMK2GQ13555 558 aaPredicted RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 TRIM61Q5EBN2 209 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 FAM102AQ5T9C2 384 aaPredicted RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 NAA35Q5VZE5 725 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 FBXL22Q6P050 247 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 CIR1Q86X95 450 aaPredicted RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 XYLT1Q86Y38 959 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 SLC41A1Q8IVJ1 513 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 APCDD1Q8J025 514 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 OR2T3Q8NH03 318 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 TOE1Q96GM8 510 aaKnown RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 HSPA12BQ96MM6 686 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 NPY6RQ99463 290 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 PRMT1Q99873 361 aaKnown RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 EDEM2Q9BV94 578 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 GPR174Q9BXC1 333 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 NUSAP1Q9BXS6 441 aaKnown RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 SIK2Q9H0K1 926 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 MTG2Q9H4K7 406 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 WDCPQ9H6R7 721 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 PRSS16Q9NQE7 514 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 PIGVQ9NUD9 493 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 WSB2Q9NYS7 404 aaPredicted RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 RRN3Q9NYV6 651 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 SUN2Q9UH99 717 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 NOCTQ9UK39 431 aaKnown RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 PILRBQ9UKJ0 227 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 ATXN2Q99700 1313 aaKnown RBP11.75□□□□□ -0.53
GGCX-202ENST00000421496 CABIN1Q9Y6J0 2220 aa11.75□□□□□ -0.53
GGCX-202ENST00000421496 DOCK4Q8N1I0 1966 aa11.74□□□□□ -0.53
GGCX-202ENST00000421496 TPRP12270 2363 aaKnown RBP11.74□□□□□ -0.53
GGCX-202ENST00000421496 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms