RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 BEND6Q5SZJ8 279 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 STRA8Q7Z7C7 330 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 PIGZQ86VD9 579 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 SUGP1Q8IWZ8 645 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 DNAJC19Q96DA6 116 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 CCDC138Q96M89 665 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 STX18Q9P2W9 335 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 CES1P23141 567 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF143P52747 638 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 BRMS1LQ5PSV4 323 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 FAM9CQ8IZT9 166 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 KLHL29Q96CT2 875 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 OSGEPQ9NPF4 335 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 TLR9Q9NR96 1032 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 CFAP97Q9P2B7 532 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 ANGPTL2Q9UKU9 493 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 FAM32AQ9Y421 112 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 ZNFX1Q9P2E3 1918 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 PCNAP12004 261 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 KRT20P35900 424 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 IL17AQ16552 155 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 RAD9BQ6WBX8 426 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 SCN9AQ15858 1988 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 LMNAP02545 664 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 LRRC74AQ0VAA2 488 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 CCNG2Q16589 344 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 TEDDM1Q5T9Z0 273 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 CACHD1Q5VU97 1274 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 MRPL45Q9BRJ2 306 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 IARS2Q9NSE4 1012 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 MORF4L1Q9UBU8 362 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 STAU1O95793 577 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 AMPD1P23109 780 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 ARFIP2P53365 341 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 STX3Q13277 289 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 C6orf10Q5SRN2 563 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 PPP1R26Q5T8A7 1209 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 LYPLAL1Q5VWZ2 237 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 PTAR1Q7Z6K3 402 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 TDRD5Q8NAT2 981 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 NPLOC4Q8TAT6 608 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 C7orf43Q8WVR3 580 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 SNX27Q96L92 541 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 C9orf72Q96LT7 481 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 ELAC2Q9BQ52 826 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 APOL2Q9BQE5 337 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 RNF103O00237 685 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 RAD51CO43502 376 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 MATKP42679 507 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 CLK2P49760 499 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 MRPS5P82675 430 aaKnown RBP10.98□□□□□ -0.65
PTCH1-206ENST00000421141 BMT2Q1RMZ1 405 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 ZACNQ401N2 412 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 TRIM60Q495X7 471 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 RAET1GQ6H3X3 334 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 LRRC49Q8IUZ0 686 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 TAGAPQ8N103 731 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 NRBF2Q96F24 287 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 ACBD6Q9BR61 282 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 GPR88Q9GZN0 384 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 ZFP14Q9HCL3 533 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 MTM1Q13496 603 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 CCDC85BQ15834 202 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 FAM71AQ8IYT1 594 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 LEMD2Q8NC56 503 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 THOC1Q96FV9 657 aaKnown RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 MRPL1Q9BYD6 325 aaKnown RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 WWP1Q9H0M0 922 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 MAP10Q9P2G4 905 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 TEKT2Q9UIF3 430 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 PTPRJQ12913 1337 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 TRIP11Q15643 1979 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 AGTP01019 485 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 GPR1P46091 355 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 MARSP56192 900 aaKnown RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 POM121L1PQ3SYA9 428 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 SPATA20Q8TB22 786 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 BTN2A3PQ96KV6 586 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ATP6V1G3Q96LB4 118 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 CATSPERZQ9NTU4 200 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 AHSPQ9NZD4 102 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ZNHIT2Q9UHR6 403 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 TAF1LQ8IZX4 1826 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 GOLGA8TH3BQL2 631 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ERBB2P04626 1255 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 C8AP07357 584 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 AIF1P55008 147 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 TAF10Q12962 218 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 TTC7BQ86TV6 843 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ECHDC2Q86YB7 292 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 PCYOX1LQ8NBM8 494 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 GMLQ99445 158 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 RASSF4Q9H2L5 321 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 TXNRD2Q9NNW7 524 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 RUVBL2Q9Y230 463 aaKnown RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ANKRD31Q8N7Z5 1873 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 E2F8A0AVK6 867 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 CACNB4O00305 520 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms