RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 AGO1Q9UL18 857 aaKnown RBP9.41□□□□□ -0.9
TRIM39-206ENST00000420746 LRRK1Q38SD2 2015 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 F8P00451 2351 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 SLC12A8A0AV02 714 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 A8MXQ7 604 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 SLC7A4O43246 635 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 ADH1BP00325 375 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 PABPC1P11940 636 aaKnown RBP9.4□□□□□ -0.9
TRIM39-206ENST00000420746 RARGP13631 454 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 WT1P19544 449 aaPredicted RBP9.4□□□□□ -0.9
TRIM39-206ENST00000420746 C5AR1P21730 350 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 GARTP22102 1010 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 CD82P27701 267 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 HOXD9P28356 352 aaPredicted RBP9.4□□□□□ -0.9
TRIM39-206ENST00000420746 CORO1AP31146 461 aaKnown RBP9.4□□□□□ -0.9
TRIM39-206ENST00000420746 UGT1A5P35504 534 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 PSEN1P49768 467 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 CYP4F2P78329 520 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 CAPRIN2Q6IMN6 1127 aaKnown RBP9.4□□□□□ -0.9
TRIM39-206ENST00000420746 GUSBP11Q6P575 273 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 PAQR9Q6ZVX9 377 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 EFL1Q7Z2Z2 1120 aaKnown RBP9.4□□□□□ -0.9
TRIM39-206ENST00000420746 DTX1Q86Y01 620 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 JAMLQ86YT9 394 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 TMEM145Q8NBT3 493 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 ZMIZ2Q8NF64 920 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 C9orf43Q8TAL5 461 aaPredicted RBP9.4□□□□□ -0.9
TRIM39-206ENST00000420746 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 MYO19Q96H55 970 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 CATSPER2Q96P56 530 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 SLC12A9Q9BXP2 914 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 PDRG1Q9NUG6 133 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 SALL4Q9UJQ4 1053 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 GGA2Q9UJY4 613 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 PCDHB11Q9Y5F2 797 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 CSNK1G3Q9Y6M4 447 aa9.4□□□□□ -0.9
TRIM39-206ENST00000420746 TBC1D3DA0A087WVF3 549 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3IA0A087WXS9 549 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 A0A087X0B3 334 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3EA0A087X179 549 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3KA0A087X1G2 549 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 A0A1W2PQ27 194 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 A0A1W2PQ64 194 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 A0A1W2PQC6 194 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TARSL2A2RTX5 802 aaKnown RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3FA6NER0 549 aaPredicted RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3LB9A6J9 549 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 MDM4O15151 490 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 MTSS1O43312 755 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 SLC26A4O43511 780 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 SIN3BO75182 1162 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 RTN2O75298 545 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 AP1G2O75843 785 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 PPP1R37O75864 691 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TNNC2P02585 160 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 CENPBP07199 599 aaPredicted RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3HP0C7X1 549 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 GRNP28799 593 aaKnown RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 SLC6A4P31645 630 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 SLC8A1P32418 973 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 HNRNPKP61978 463 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 EHHADHQ08426 723 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 SPIDRQ14159 915 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 SURF1Q15526 300 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TMEM119Q4V9L6 283 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 SETMARQ53H47 684 aaPredicted RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 C10orf120Q5SQS8 335 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 MBLAC2Q68D91 279 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3GQ6DHY5 549 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3CQ6IPX1 549 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 DTHD1Q6ZMT9 781 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 RAB11FIP2Q7L804 512 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 VASH2Q86V25 355 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 MMAAQ8IVH4 418 aaKnown RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TBC1D3Q8IZP1 549 aaPredicted RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 ZNF557Q8N988 423 aaPredicted RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 GALNT11Q8NCW6 608 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 NAT6Q93015 286 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 TNIP3Q96KP6 325 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 EPAS1Q99814 870 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 B3GNT4Q9C0J1 378 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 STRADBQ9C0K7 418 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 PDE11AQ9HCR9 933 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 PNPLA8Q9NP80 782 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 KRT82Q9NSB4 513 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 ABCB8Q9NUT2 735 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 CLIC5Q9NZA1 410 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 NOL7Q9UMY1 257 aaKnown RBP9.39□□□□□ -0.91
TRIM39-206ENST00000420746 EXOC7Q9UPT5 735 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 PCDHA5Q9Y5H7 936 aa9.39□□□□□ -0.91
TRIM39-206ENST00000420746 A1L4Q6 167 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 WIPF3A6NGB9 483 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 NTN3O00634 580 aaPredicted RBP9.38□□□□□ -0.91
TRIM39-206ENST00000420746 TPP1O14773 563 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 DTNBO60941 627 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 TBCAO75347 108 aaKnown RBP9.38□□□□□ -0.91
TRIM39-206ENST00000420746 VPS4BO75351 444 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 PRPF6O94906 941 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms