RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 HERPUD2Q9BSE4 406 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 HEMGNQ9BXL5 484 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 MAK16Q9BXY0 300 aaKnown RBP12.88□□□□□ -0.35
TMEM53-206ENST00000420706 OSBPL8Q9BZF1 889 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 ZYG11BQ9C0D3 744 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 THG1LQ9NWX6 298 aaKnown RBP12.88□□□□□ -0.35
TMEM53-206ENST00000420706 DUS2Q9NX74 493 aaKnown RBP12.88□□□□□ -0.35
TMEM53-206ENST00000420706 MPP6Q9NZW5 540 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 NEU3Q9UQ49 428 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 FAM50BQ9Y247 325 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 EFR3BQ9Y2G0 817 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 NR2E1Q9Y466 385 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 WASH4PA8MWX3 477 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 DCLK1O15075 740 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
TMEM53-206ENST00000420706 CNTN5O94779 1100 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 RHOQP17081 205 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 PSMC3P17980 439 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 EPHB2P29323 1055 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 IFNAR2P48551 515 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 IRAK1P51617 712 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 VCPP55072 806 aaKnown RBP12.87□□□□□ -0.35
TMEM53-206ENST00000420706 RPS24P62847 133 aaKnown RBP12.87□□□□□ -0.35
TMEM53-206ENST00000420706 HTR4Q13639 388 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 EML3Q32P44 896 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 MPPE1Q53F39 396 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 RABGAP1LQ5R372 815 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 KAZNQ674X7 775 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 RWDD4Q6NW29 188 aaKnown RBP12.87□□□□□ -0.35
TMEM53-206ENST00000420706 RHBDF2Q6PJF5 856 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 NLRP14Q86W24 1093 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 SLC13A5Q86YT5 568 aaPredicted RBP12.87□□□□□ -0.35
TMEM53-206ENST00000420706 CREG2Q8IUH2 290 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 CFAP52Q8N1V2 620 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 ACTRT1Q8TDG2 376 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 DEPDC1BQ8WUY9 529 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 IRF7Q92985 503 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 ASIC4Q96FT7 647 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 P2RY11Q96G91 374 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 MS4A14Q96JA4 679 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 PRICKLE1Q96MT3 831 aaPredicted RBP12.87□□□□□ -0.35
TMEM53-206ENST00000420706 RETREG1Q9H6L5 497 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 CATSPERBQ9H7T0 1116 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 PRDM16Q9HAZ2 1276 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 ARHGEF4Q9NR80 690 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 ETNK2Q9NVF9 386 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 TTC7AQ9ULT0 858 aaPredicted RBP12.87□□□□□ -0.35
TMEM53-206ENST00000420706 NUMBLQ9Y6R0 609 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 DOCK4Q8N1I0 1966 aa12.87□□□□□ -0.35
TMEM53-206ENST00000420706 CHADO15335 359 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 FGF10O15520 208 aaPredicted RBP12.86□□□□□ -0.35
TMEM53-206ENST00000420706 CST8O60676 142 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 TBL1XO60907 577 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 CDH4P55283 916 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 TFDP2Q14188 446 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 GRM2Q14416 872 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 PDGFRLQ15198 375 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 DHCR24Q15392 516 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 DNTTIP2Q5QJE6 756 aaKnown RBP12.86□□□□□ -0.35
TMEM53-206ENST00000420706 SLC9A4Q6AI14 798 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 TMEM25Q86YD3 366 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 YAF2Q8IY57 180 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 HJURPQ8NCD3 748 aaPredicted RBP12.86□□□□□ -0.35
TMEM53-206ENST00000420706 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.86□□□□□ -0.35
TMEM53-206ENST00000420706 RSAD2Q8WXG1 361 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 ZFYVE19Q96K21 471 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 TRMT61BQ9BVS5 477 aaKnown RBP12.86□□□□□ -0.35
TMEM53-206ENST00000420706 SPHK2Q9NRA0 654 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 TMEM248Q9NWD8 314 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 ZNF212Q9UDV6 495 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 LIMD1Q9UGP4 676 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 MFHAS1Q9Y4C4 1052 aa12.86□□□□□ -0.35
TMEM53-206ENST00000420706 KIF26AQ9ULI4 1882 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-206ENST00000420706 TCRBV7S2A1N4TA0A589 114 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 APOL1O14791 398 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 CLDN11O75508 207 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 TJP3O95049 919 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 FGGP02679 453 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 CYBBP04839 570 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 ZFXP17010 805 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-206ENST00000420706 GDI1P31150 447 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 KLF1Q13351 362 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-206ENST00000420706 TUBB2AQ13885 445 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 PAFAH1B3Q15102 231 aaKnown RBP12.85□□□□□ -0.35
TMEM53-206ENST00000420706 LONRF2Q1L5Z9 754 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 LY6G5CQ5SRR4 150 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 MPP7Q5T2T1 576 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 TTC39BQ5VTQ0 682 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-206ENST00000420706 FYB2Q5VWT5 728 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 RNF43Q68DV7 783 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 NCBP2-AS2Q69YL0 99 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 BBS12Q6ZW61 710 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 CHST9Q7L1S5 443 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 CIR1Q86X95 450 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-206ENST00000420706 PLD5Q8N7P1 536 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms