RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	ITGAL	P20701	1170 aa		13.52	□□□□□ -0.25
BDNF-208	ENST00000418212	ADSS	P30520	456 aa		13.52	□□□□□ -0.25
BDNF-208	ENST00000418212	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.52	□□□□□ -0.25
BDNF-208	ENST00000418212	TMEM86A	Q8N2M4	240 aa		13.52	□□□□□ -0.25
BDNF-208	ENST00000418212	IPP	Q9Y573	584 aa		13.52	□□□□□ -0.25
BDNF-208	ENST00000418212	MYH2	Q9UKX2	1941 aa		13.52	□□□□□ -0.25
BDNF-208	ENST00000418212	AGPS	O00116	658 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	NQO1	P15559	274 aa	Known RBP	13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	EPB42	P16452	691 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	RPA3	P35244	121 aa	Predicted RBP	13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	INPP1	P49441	399 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	SPDYE7P	Q495Y7	208 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	TMEM154	Q6P9G4	183 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	SIAH1	Q8IUQ4	282 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	TEX9	Q8N6V9	391 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	PPTC7	Q8NI37	304 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	DNAJC9	Q8WXX5	260 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	MYLPF	Q96A32	169 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	EIF2A	Q9BY44	585 aa	Known RBP	13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	LRRC19	Q9H756	370 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	SLCO1B3	Q9NPD5	702 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	RIC8B	Q9NVN3	520 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	DLGAP2	Q9P1A6	1054 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	SLC25A13	Q9UJS0	675 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	ARHGAP10	A1A4S6	786 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	CRYBB1	P53674	252 aa	Predicted RBP	13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	NAGLU	P54802	743 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	INPP5A	Q14642	412 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	UNC5A	Q6ZN44	842 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	ATAD1	Q8NBU5	361 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	ECSIT	Q9BQ95	431 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	DRG1	Q9Y295	367 aa	Known RBP	13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	SH3BGRL	O75368	114 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	C4BPA	P04003	597 aa	Known RBP	13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	UBTFL6	P0CB48	400 aa	Predicted RBP	13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	NFKB1	P19838	968 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	CCND1	P24385	295 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	GRM5	P41594	1212 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	AGK	Q53H12	422 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	POLN	Q7Z5Q5	900 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	CPNE8	Q86YQ8	564 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	ZNF75CP	Q92670	426 aa	Predicted RBP	13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	ADGRE3	Q9BY15	652 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	TTYH3	Q9C0H2	523 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	MPP6	Q9NZW5	540 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	PLA2G4C	Q9UP65	541 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	VPS9D1	Q9Y2B5	631 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212	NCAN	O14594	1321 aa		13.51	□□□□□ -0.25
BDNF-208	ENST00000418212		A0A0A0MRY4	1105 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	TRIM13	O60858	407 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	KATNA1	O75449	491 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	ATP6V1E1	P36543	226 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	KLC1	Q07866	573 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	TAF5	Q15542	800 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	LRRC38	Q5VT99	294 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	CHADL	Q6NUI6	762 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	NEPRO	Q6NW34	567 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	YTHDF3	Q7Z739	585 aa	Known RBP	13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	ZNF333	Q96JL9	665 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	SPATA13	Q96N96	652 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	SYNDIG1	Q9H7V2	258 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	RGS18	Q9NS28	235 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	CHCHD3	Q9NX63	227 aa	Known RBP	13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	RBPJL	Q9UBG7	517 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	B4GALT4	O60513	344 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	BAIAP3	O94812	1187 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	MMP3	P08254	477 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	GRK2	P25098	689 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	SH3BGR	P55822	239 aa	Predicted RBP	13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	STX5	Q13190	355 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	NOMO2	Q5JPE7	1267 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	C16orf89	Q6UX73	402 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	MIER2	Q8N344	545 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	CNDP1	Q96KN2	507 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	OSGEPL1	Q9H4B0	414 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	CLCA2	Q9UQC9	943 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	TRPC5OS	A6NMA1	111 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	FCHO1	O14526	889 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	ERBB2	P04626	1255 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	ATP6V1B1	P15313	513 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	TUFM	P49411	452 aa	Known RBP	13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	ELF3	P78545	371 aa	Predicted RBP	13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	GBE1	Q04446	702 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	APTX	Q7Z2E3	356 aa	Known RBP	13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	TFAP2B	Q92481	460 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	DACH2	Q96NX9	599 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	ACTR8	Q9H981	624 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	ABCC13	Q9NSE7	274 aa		13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	COL1A1	P02452	1464 aa	Predicted RBP	13.5	□□□□□ -0.25
BDNF-208	ENST00000418212	TM9SF1	O15321	606 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	DCX	O43602	365 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ATP5C1	P36542	298 aa	Known RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	BOP1	Q14137	746 aa	Known RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	LZTR1	Q8N653	840 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	CYGB	Q8WWM9	190 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	RSPH1	Q8WYR4	309 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	USP13	Q92995	863 aa	Predicted RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	CATSPER2	Q96P56	530 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	DEFB118	Q96PH6	123 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	EFCAB1	Q9HAE3	211 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms