RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PRKCGP05129 697 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 EIF2S1P05198 315 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 RALBP11234 206 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 IL1R1P14778 569 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 PROZP22891 400 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 KPNA1P52294 538 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 NFIXQ14938 502 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 ZACNQ401N2 412 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 PPP6R3Q5H9R7 873 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 NHSL2Q5HYW2 709 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 C6orf183Q5T699 404 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF354CQ86Y25 554 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC15A4Q8N697 577 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 TMEM161BQ8NDZ6 487 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 USP13Q92995 863 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 RCN3Q96D15 328 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC29A1Q99808 456 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 DRC3Q9H069 523 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 CDH19Q9H159 772 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 TCF7L2Q9NQB0 619 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 DUS2Q9NX74 493 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 NYAP2Q9P242 653 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 COPG2Q9UBF2 871 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 DCDC2Q9UHG0 476 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 SPDYE2BA6NHP3 402 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 CFLARO15519 480 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 SNAP91O60641 907 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 LRCH4O75427 683 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 ALDOAP04075 364 aaKnown RBP8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 SPDYE6P0CI01 402 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 JAK1P23458 1154 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 RPL10P27635 214 aaKnown RBP8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 CLDN10P78369 228 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 PHKG1Q16816 387 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 SPDYE2Q495Y8 402 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 DARS2Q6PI48 645 aaKnown RBP8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 RFX6Q8HWS3 928 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 GPD1LQ8N335 351 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 ARFGAP1Q8N6T3 406 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 TNIP2Q8NFZ5 429 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 MAPK15Q8TD08 544 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF606Q8WXB4 792 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 TAMM41Q96BW9 452 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 ANKRD36BP1Q96IX9 119 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 NSMCE3Q96MG7 304 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 OR52B2Q96RD2 323 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 PDZD7Q9H5P4 517 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 RIC8BQ9NVN3 520 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 UTP6Q9NYH9 597 aaKnown RBP8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 H0YIN7 160 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC22A2O15244 555 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 ENO3P13929 434 aaPredicted RBP8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 ZBTB17Q13105 803 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 RFTN1Q14699 578 aaPredicted RBP8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 GPR107Q5VW38 600 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF781Q8N8C0 355 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 DEPDC1BQ8WUY9 529 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 LRTOMTQ8WZ04 291 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 TFAP2CQ92754 450 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 ATP6V0A1Q93050 837 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 CCDC138Q96M89 665 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 RIT2Q99578 217 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 PAK5Q9P286 719 aa8.21□□□□□ -1.09
HMGXB4-202ENST00000418170 IQCA1LA6NCM1 817 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 STX16-NPEPL1H3BU86 382 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 CSPG5O95196 566 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 FGFR3P22607 806 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 UBXN2AP68543 259 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 IKQ13123 557 aaPredicted RBP8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 NOMO1Q15155 1222 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 TRIM16LQ309B1 348 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 CCDC24Q8N4L8 307 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 SLC7A3Q8WY07 619 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 ACDQ96AP0 544 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 ASB9Q96DX5 294 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 ZMAT2Q96NC0 199 aaKnown RBP8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 ACO2Q99798 780 aaKnown RBP8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 RNPEPQ9H4A4 650 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 PRDM16Q9HAZ2 1276 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 FAM47E-STBD1D6RA91 191 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 KPNA4O00629 521 aaPredicted RBP8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 TPP1O14773 563 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 LSM8O95777 96 aaKnown RBP8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 PTPN2P17706 415 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 PSMA2P25787 234 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 MAGEA6P43360 314 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 GSSP48637 474 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 PMS2P3Q13401 168 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 CAMK2BQ13554 666 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 RAB39AQ14964 217 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 HADHQ16836 314 aaKnown RBP8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 MTX3Q5HYI7 312 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 TDRD10Q5VZ19 366 aaKnown RBP8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF786Q8N393 782 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 CIB1Q99828 191 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 KIFC3Q9BVG8 833 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 APOBEC3GQ9HC16 384 aaKnown RBP8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 TMEM9Q9P0T7 183 aa8.21□□□□□ -1.1
HMGXB4-202ENST00000418170 PFDN6O15212 129 aa8.2□□□□□ -1.1
HMGXB4-202ENST00000418170 AKAP10O43572 662 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms