RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 BPIFB4P59827 614 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 MTA1Q13330 715 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 ARID5BQ14865 1188 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 ST3GAL2Q16842 350 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 HSP90AA4PQ58FG1 418 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 WDTC1Q8N5D0 677 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 ATP6V0D2Q8N8Y2 350 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 MIR1-1HGQ9H1L0 117 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 SIX2Q9NPC8 291 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 SCML1Q9UN30 329 aa26.22■■□□□ 1.79
VEGFA-208ENST00000417285 KCNU1A8MYU2 1149 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 H0Y626 953 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 BCAT2O15382 392 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-208ENST00000417285 LUC7L3O95232 432 aaKnown RBP26.21■■□□□ 1.79
VEGFA-208ENST00000417285 RDXP35241 583 aaKnown RBP26.21■■□□□ 1.79
VEGFA-208ENST00000417285 CSKP41240 450 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 RPS14P62263 151 aaKnown RBP26.21■■□□□ 1.79
VEGFA-208ENST00000417285 EIF4EBP2Q13542 120 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-208ENST00000417285 TTC31Q49AM3 519 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-208ENST00000417285 MIIPQ5JXC2 388 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 FAM124AQ86V42 546 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 LGI2Q8N0V4 545 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 CFAP52Q8N1V2 620 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 ZNF366Q8N895 744 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 CKAP5Q14008 2032 aa26.21■■□□□ 1.79
VEGFA-208ENST00000417285 PES1O00541 588 aaKnown RBP26.2■■□□□ 1.78
VEGFA-208ENST00000417285 RNASEH1O60930 286 aaKnown RBP26.2■■□□□ 1.78
VEGFA-208ENST00000417285 HSF2BPO75031 334 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 SRPRAP08240 638 aaKnown RBP26.2■■□□□ 1.78
VEGFA-208ENST00000417285 CD59P13987 128 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 ABCB4P21439 1286 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 TACR2P21452 398 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 FOXC1Q12948 553 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 SLC12A1Q13621 1099 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 KCNJ12Q14500 433 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 TAF5Q15542 800 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 HNRNPA1L2Q32P51 320 aaKnown RBP26.2■■□□□ 1.78
VEGFA-208ENST00000417285 ZNF776Q68DI1 518 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-208ENST00000417285 IL27RAQ6UWB1 636 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 CACUL1Q86Y37 369 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 MYEOVQ96EZ4 313 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 SLC2A13Q96QE2 648 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 CPXM1Q96SM3 734 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 BTBD1Q9H0C5 482 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 RSPH9Q9H1X1 276 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-208ENST00000417285 AJAP1Q9UKB5 411 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-208ENST00000417285 INTS6Q9UL03 887 aaKnown RBP26.2■■□□□ 1.78
VEGFA-208ENST00000417285 NCKAP1Q9Y2A7 1128 aa26.2■■□□□ 1.78
VEGFA-208ENST00000417285 USP24Q9UPU5 2620 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 TARSL2A2RTX5 802 aaKnown RBP26.19■■□□□ 1.78
VEGFA-208ENST00000417285 F5H5T6 163 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 FOXN3O00409 490 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-208ENST00000417285 GJB3O75712 270 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 CCR1P32246 355 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 FSCBQ5H9T9 825 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 PITRM1Q5JRX3 1037 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 RAP1GAP2Q684P5 730 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 C11orf57Q6ZUT1 292 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-208ENST00000417285 CHSY1Q86X52 802 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 PASD1Q8IV76 773 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 DEFB106AQ8N104 65 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 ZCCHC9Q8N567 271 aaKnown RBP26.19■■□□□ 1.78
VEGFA-208ENST00000417285 C1orf216Q8TAB5 229 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 RNF34Q969K3 372 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 MYO19Q96H55 970 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 FAM204AQ9H8W3 233 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 SGK2Q9HBY8 427 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 EIF2B4Q9UI10 523 aaKnown RBP26.19■■□□□ 1.78
VEGFA-208ENST00000417285 XPO7Q9UIA9 1087 aaKnown RBP26.19■■□□□ 1.78
VEGFA-208ENST00000417285 WASF3Q9UPY6 502 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 ERVW-1Q9UQF0 538 aa26.19■■□□□ 1.78
VEGFA-208ENST00000417285 EEF1GP26641 437 aaKnown RBP26.18■■□□□ 1.78
VEGFA-208ENST00000417285 ACSL1P33121 698 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 OXCT1P55809 520 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 SIM1P81133 766 aaPredicted RBP26.18■■□□□ 1.78
VEGFA-208ENST00000417285 ECT2LQ008S8 904 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 GRIK2Q13002 908 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 TTC39BQ5VTQ0 682 aaPredicted RBP26.18■■□□□ 1.78
VEGFA-208ENST00000417285 USP30Q70CQ3 517 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 OR2I1PQ8NGU4 316 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 MRGPRX3Q96LB0 322 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 PPP1R9BQ96SB3 815 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 OSGEPQ9NPF4 335 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 SAMSN1Q9NSI8 373 aaKnown RBP26.18■■□□□ 1.78
VEGFA-208ENST00000417285 CEP83Q9Y592 693 aa26.18■■□□□ 1.78
VEGFA-208ENST00000417285 GOLGA6L22H0YM25 854 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 TRIM16O95361 564 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 SEMA4FO95754 770 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 CLCN1P35523 988 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 TCP11X2Q5H9J9 407 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 RABGAP1LQ5R372 815 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 OR6B2Q6IFH4 312 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 ZDHHC17Q8IUH5 632 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 FAM71AQ8IYT1 594 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 C6orf106Q9H6K1 298 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-208ENST00000417285 SYNCQ9H7C4 482 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 TMEM51Q9NW97 253 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 DDIT4Q9NX09 232 aa26.17■■□□□ 1.78
VEGFA-208ENST00000417285 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-208ENST00000417285 FRYQ5TBA9 3013 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms