RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 ELOVL6Q9H5J4 265 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 VTI1BQ9UEU0 232 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 RABGEF1Q9UJ41 708 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 A0A087WXM4 84 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 A0A1W2PPM1 405 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 RRN3P2A6NIE6 340 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 F5H5T6 163 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 CYP7B1O75881 506 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 LCA5LO95447 670 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 MAPK1P28482 360 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 RXRBP28702 533 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 RGS2P41220 211 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 STARD3Q14849 445 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 HTR3CQ8WXA8 447 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 NMRAL1Q9HBL8 299 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 SLC38A7Q9NVC3 462 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 TSPAN16Q9UKR8 245 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 A0A0B4J269 797 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 SCNN1BP51168 640 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 GALK1P51570 392 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CCNHP51946 323 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 SPANXN3Q5MJ09 141 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 TIGD7Q6NT04 549 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 MARK2Q7KZI7 788 aaKnown RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 EXOC3L1Q86VI1 746 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 KRT78Q8N1N4 520 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 POC5Q8NA72 575 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CLEC4MQ9H2X3 399 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 RBM22Q9NW64 420 aaKnown RBP eCLIP12.28□□□□□ -0.445e-8■■■■■ 50.9
UBR4-205ENST00000417040 NMRK1Q9NWW6 199 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 KCNK4Q9NYG8 393 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 TUBGCP4Q9UGJ1 667 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 DSEQ9UL01 958 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CBX4O00257 560 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 HBP1O60381 514 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 DBTP11182 482 aaKnown RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 ODC1P11926 461 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ZFP1Q6P2D0 407 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CASP12Q6UXS9 341 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 FBXO39Q8N4B4 442 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 FAM81AQ8TBF8 368 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ZNF606Q8WXB4 792 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 LPAR1Q92633 364 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 OMDQ99983 421 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CHID1Q9BWS9 393 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ABCG8Q9H221 673 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 LRMDAQ9H2I8 198 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 PARVBQ9HBI1 364 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 GP5P40197 560 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 NDST1P52848 882 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 PTPN11Q06124 597 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 ADIGQ0VDE8 80 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 MEA1Q16626 185 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 TTLL9Q3SXZ7 439 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ZNF605Q86T29 641 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 DCP1BQ8IZD4 617 aaKnown RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 DNAJB14Q8TBM8 379 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 MCRS1Q96EZ8 462 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CLPTM1LQ96KA5 538 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 APOL4Q9BPW4 351 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 TBL1YQ9BQ87 522 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ACTR8Q9H981 624 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CNTNAP2Q9UHC6 1331 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CEP152O94986 1710 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 SNTNA6NMZ2 147 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 SYNCRIPO60506 623 aaKnown RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 TSPAN19P0C672 248 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 PIK3R1P27986 724 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 SREBF1P36956 1147 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 NAMPTP43490 491 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 SLC5A9Q2M3M2 681 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 SPANXN2Q5MJ10 180 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 ARMC3Q5W041 872 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 WDR59Q6PJI9 974 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 DHDDSQ86SQ9 333 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 IZUMO1Q8IYV9 350 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 C8orf59Q8N0T1 100 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 LNX1Q8TBB1 728 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 GIPC3Q8TF64 312 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ZBTB45Q96K62 511 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 RAD21L1Q9H4I0 556 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 KRCC1Q9NPI7 259 aaPredicted RBP12.28□□□□□ -0.44
UBR4-205ENST00000417040 INVSQ9Y283 1065 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 CASTOR2A6NHX0 329 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 MAGEB2O15479 319 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 KRT20P35900 424 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.28□□□□□ -0.44
UBR4-205ENST00000417040 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 PGBD3Q8N328 593 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 RSPH1Q8WYR4 309 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 SNTG2Q9NY99 539 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 RNF181Q9P0P0 153 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ZNF112Q9UJU3 913 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 ZNF222Q9UK12 451 aa12.28□□□□□ -0.44
UBR4-205ENST00000417040 SIK3Q9Y2K2 1263 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms