RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CACNA1BQ00975 2339 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 H0Y626 953 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 FOXN3O00409 490 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 DNTTP04053 509 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 CSKP41240 450 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 BPIFB4P59827 614 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 RPS14P62263 151 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 SLC14A1Q13336 389 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 TAF5Q15542 800 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 TTC31Q49AM3 519 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 VWA3BQ502W6 1294 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 RAP1GAP2Q684P5 730 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 ZNF776Q68DI1 518 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 C11orf57Q6ZUT1 292 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 CFAP52Q8N1V2 620 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 SLC2A13Q96QE2 648 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 TUBGCP2Q9BSJ2 902 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 NDST4Q9H3R1 872 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 FAM204AQ9H8W3 233 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 CEP83Q9Y592 693 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 LAMA1P25391 3075 aa18.2■□□□□ 0.5
PDLIM2-208ENST00000416159 MUC22E2RYF6 1773 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 KCNU1A8MYU2 1149 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 F5H5T6 163 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 BCAT2O15382 392 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 HSF2BPO75031 334 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 SRPRAP08240 638 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 ABCB4P21439 1286 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 CLCN1P35523 988 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 PITX1P78337 314 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 SFSWAPQ12872 951 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 FOXC1Q12948 553 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 MTA1Q13330 715 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 HNRNPDQ14103 355 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 DPCR1Q3MIW9 517 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 FSCBQ5H9T9 825 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 CT47A1Q5JQC4 288 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 PITRM1Q5JRX3 1037 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 OR6B2Q6IFH4 312 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 PASD1Q8IV76 773 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 ZCCHC9Q8N567 271 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 RNF34Q969K3 372 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 MYO19Q96H55 970 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 BTBD1Q9H0C5 482 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 NUP62CLQ9H1M0 184 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 EIF2B4Q9UI10 523 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 AJAP1Q9UKB5 411 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 SCML1Q9UN30 329 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 ERVW-1Q9UQF0 538 aa18.19■□□□□ 0.5
PDLIM2-208ENST00000416159 RNASEH1O60930 286 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 GJB3O75712 270 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 CD59P13987 128 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 CCR1P32246 355 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 ACSL1P33121 698 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 GRIK2Q13002 908 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 SLC12A1Q13621 1099 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 ARID5BQ14865 1188 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 ST3GAL2Q16842 350 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 HNRNPA1L2Q32P51 320 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 MIIPQ5JXC2 388 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 SLC47A2Q86VL8 602 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 FAM71AQ8IYT1 594 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 C1orf131Q8NDD1 294 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 OR2I1PQ8NGU4 316 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 MRGPRX3Q96LB0 322 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 PRMT1Q99873 361 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 RSPH9Q9H1X1 276 aaPredicted RBP18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 SGK2Q9HBY8 427 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 DDIT4Q9NX09 232 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 NCKAP1Q9Y2A7 1128 aa18.18■□□□□ 0.5
PDLIM2-208ENST00000416159 TARSL2A2RTX5 802 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 SIN3BO75182 1162 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 GRAP2O75791 330 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 SEMA4FO95754 770 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 OXCT1P55809 520 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 ECT2LQ008S8 904 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 SLC6A3Q01959 620 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 RABGAP1LQ5R372 815 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 TTC39BQ5VTQ0 682 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 RNF219Q5W0B1 726 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 IL27RAQ6UWB1 636 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 MMS22LQ6ZRQ5 1243 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 FAM183BPQ6ZVS7 135 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 USP30Q70CQ3 517 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 SLC26A9Q7LBE3 791 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 ZDHHC17Q8IUH5 632 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 PPP1R9BQ96SB3 815 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 MTG2Q9H4K7 406 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 C6orf106Q9H6K1 298 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 SYNCQ9H7C4 482 aa18.17■□□□□ 0.5
PDLIM2-208ENST00000416159 SYNJ2BP-COX16A0A087WUM0 186 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 PES1O00541 588 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 DAB1O75553 588 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 ERBB2P04626 1255 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 NOS2P35228 1153 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 RDXP35241 583 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 NNMTP40261 264 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 SULT2A1Q06520 285 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 KCNMA1Q12791 1236 aa18.16■□□□□ 0.5
PDLIM2-208ENST00000416159 DRAP1Q14919 205 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms