RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 E2F7Q96AV8 911 aa3.35□□□□□ -1.87
APP-207ENST00000415997 GAD1Q99259 594 aa3.35□□□□□ -1.87
APP-207ENST00000415997 TMEM47Q9BQJ4 181 aa3.35□□□□□ -1.87
APP-207ENST00000415997 AARSD1Q9BTE6 412 aaKnown RBP3.35□□□□□ -1.87
APP-207ENST00000415997 TPSD1Q9BZJ3 242 aa3.35□□□□□ -1.87
APP-207ENST00000415997 FBRSL1Q9HCM7 1045 aaKnown RBP3.35□□□□□ -1.87
APP-207ENST00000415997 UCKL1Q9NWZ5 548 aa3.35□□□□□ -1.87
APP-207ENST00000415997 GALNT8Q9NY28 637 aa3.35□□□□□ -1.87
APP-207ENST00000415997 DACT1Q9NYF0 836 aa3.35□□□□□ -1.87
APP-207ENST00000415997 CEP72Q9P209 647 aa3.35□□□□□ -1.87
APP-207ENST00000415997 NOP58Q9Y2X3 529 aaKnown RBP3.35□□□□□ -1.87
APP-207ENST00000415997 TRAF6Q9Y4K3 522 aa3.35□□□□□ -1.87
APP-207ENST00000415997 PCDHGB2Q9Y5G2 931 aa3.35□□□□□ -1.87
APP-207ENST00000415997 ATP23Q9Y6H3 246 aa3.35□□□□□ -1.87
APP-207ENST00000415997 CSPG4Q6UVK1 2322 aa3.35□□□□□ -1.87
APP-207ENST00000415997 IGKV6D-21A0A0A0MT36 114 aa3.34□□□□□ -1.87
APP-207ENST00000415997 ANO9A1A5B4 782 aa3.34□□□□□ -1.87
APP-207ENST00000415997 GOLIM4O00461 696 aa3.34□□□□□ -1.87
APP-207ENST00000415997 FLRT2O43155 660 aa3.34□□□□□ -1.87
APP-207ENST00000415997 EGFP01133 1207 aa3.34□□□□□ -1.87
APP-207ENST00000415997 SRGAP2CP0DJJ0 459 aa3.34□□□□□ -1.87
APP-207ENST00000415997 HNRNPLP14866 589 aaKnown RBP eCLIP3.34□□□□□ -1.87
APP-207ENST00000415997 DARSP14868 501 aaKnown RBP3.34□□□□□ -1.87
APP-207ENST00000415997 VAMP1P23763 118 aa3.34□□□□□ -1.87
APP-207ENST00000415997 MFAP1P55081 439 aaKnown RBP3.34□□□□□ -1.87
APP-207ENST00000415997 GRSF1Q12849 480 aaKnown RBP eCLIP3.34□□□□□ -1.87
APP-207ENST00000415997 GRIK2Q13002 908 aa3.34□□□□□ -1.87
APP-207ENST00000415997 TARDBPQ13148 414 aaKnown RBP eCLIP3.34□□□□□ -1.87
APP-207ENST00000415997 NFYCQ13952 458 aa3.34□□□□□ -1.87
APP-207ENST00000415997 RAB33AQ14088 237 aa3.34□□□□□ -1.87
APP-207ENST00000415997 QRICH1Q2TAL8 776 aa3.34□□□□□ -1.87
APP-207ENST00000415997 USP41Q3LFD5 358 aa3.34□□□□□ -1.87
APP-207ENST00000415997 FBXO43Q4G163 708 aa3.34□□□□□ -1.87
APP-207ENST00000415997 YOD1Q5VVQ6 348 aaPredicted RBP3.34□□□□□ -1.87
APP-207ENST00000415997 BROXQ5VW32 411 aa3.34□□□□□ -1.87
APP-207ENST00000415997 PRSS55Q6UWB4 352 aaPredicted RBP3.34□□□□□ -1.87
APP-207ENST00000415997 MRPL10Q7Z7H8 261 aaKnown RBP3.34□□□□□ -1.87
APP-207ENST00000415997 MTDHQ86UE4 582 aaKnown RBP3.34□□□□□ -1.87
APP-207ENST00000415997 TMPRSS6Q8IU80 811 aa3.34□□□□□ -1.87
APP-207ENST00000415997 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.34□□□□□ -1.87
APP-207ENST00000415997 LNX1Q8TBB1 728 aaPredicted RBP3.34□□□□□ -1.87
APP-207ENST00000415997 SSH3Q8TE77 659 aa3.34□□□□□ -1.87
APP-207ENST00000415997 SSH1Q8WYL5 1049 aa3.34□□□□□ -1.87
APP-207ENST00000415997 OSBP2Q969R2 916 aa3.34□□□□□ -1.87
APP-207ENST00000415997 MRRFQ96E11 262 aaKnown RBP3.34□□□□□ -1.87
APP-207ENST00000415997 LGMNQ99538 433 aa3.34□□□□□ -1.87
APP-207ENST00000415997 DPH1Q9BZG8 443 aa3.34□□□□□ -1.87
APP-207ENST00000415997 OR10A2Q9H208 303 aa3.34□□□□□ -1.87
APP-207ENST00000415997 CPVLQ9H3G5 476 aa3.34□□□□□ -1.87
APP-207ENST00000415997 NELFAQ9H3P2 528 aa3.34□□□□□ -1.87
APP-207ENST00000415997 IL21RQ9HBE5 538 aa3.34□□□□□ -1.87
APP-207ENST00000415997 AURKAIP1Q9NWT8 199 aaPredicted RBP3.34□□□□□ -1.87
APP-207ENST00000415997 SNTG2Q9NY99 539 aa3.34□□□□□ -1.87
APP-207ENST00000415997 BTBD3Q9Y2F9 522 aa3.34□□□□□ -1.87
APP-207ENST00000415997 MRPL11Q9Y3B7 192 aaKnown RBP3.34□□□□□ -1.87
APP-207ENST00000415997 PCDHGA1Q9Y5H4 931 aa3.34□□□□□ -1.87
APP-207ENST00000415997 WNT6Q9Y6F9 365 aa3.34□□□□□ -1.87
APP-207ENST00000415997 MEGF8Q7Z7M0 2845 aa3.34□□□□□ -1.87
APP-207ENST00000415997 ACANP16112 2415 aa3.34□□□□□ -1.87
APP-207ENST00000415997 COL1A2P08123 1366 aa3.34□□□□□ -1.88
APP-207ENST00000415997 MXRA5Q9NR99 2828 aa3.34□□□□□ -1.88
APP-207ENST00000415997 PRRC2CQ9Y520 2896 aaKnown RBP3.33□□□□□ -1.88
APP-207ENST00000415997 MAP1AP78559 2803 aaPredicted RBP3.33□□□□□ -1.88
APP-207ENST00000415997 A0A0G2JNJ9 132 aa3.33□□□□□ -1.88
APP-207ENST00000415997 A0A1W2PRX2 142 aa3.33□□□□□ -1.88
APP-207ENST00000415997 SLC26A4O43511 780 aa3.33□□□□□ -1.88
APP-207ENST00000415997 FAM20BO75063 409 aa3.33□□□□□ -1.88
APP-207ENST00000415997 RECQL4O94761 1208 aa3.33□□□□□ -1.88
APP-207ENST00000415997 NUDT3O95989 172 aa3.33□□□□□ -1.88
APP-207ENST00000415997 VTNP04004 478 aa3.33□□□□□ -1.88
APP-207ENST00000415997 GNAI3P08754 354 aa3.33□□□□□ -1.88
APP-207ENST00000415997 FGRP09769 529 aa3.33□□□□□ -1.88
APP-207ENST00000415997 PYGMP11217 842 aa3.33□□□□□ -1.88
APP-207ENST00000415997 TOP1P11387 765 aaKnown RBP3.33□□□□□ -1.88
APP-207ENST00000415997 PRF1P14222 555 aa3.33□□□□□ -1.88
APP-207ENST00000415997 PTPN2P17706 415 aa3.33□□□□□ -1.88
APP-207ENST00000415997 KRT4P19013 534 aa3.33□□□□□ -1.88
APP-207ENST00000415997 DRD1P21728 446 aa3.33□□□□□ -1.88
APP-207ENST00000415997 HOXA13P31271 388 aaPredicted RBP3.33□□□□□ -1.88
APP-207ENST00000415997 CASRP41180 1078 aa3.33□□□□□ -1.88
APP-207ENST00000415997 SLC26A2P50443 739 aa3.33□□□□□ -1.88
APP-207ENST00000415997 CLDN6P56747 220 aa3.33□□□□□ -1.88
APP-207ENST00000415997 BNC1Q01954 994 aa3.33□□□□□ -1.88
APP-207ENST00000415997 SP4Q02446 784 aa3.33□□□□□ -1.88
APP-207ENST00000415997 EIF4HQ15056 248 aaKnown RBP3.33□□□□□ -1.88
APP-207ENST00000415997 GPR19Q15760 415 aa3.33□□□□□ -1.88
APP-207ENST00000415997 ITPRIPL2Q3MIP1 535 aa3.33□□□□□ -1.88
APP-207ENST00000415997 ARL13BQ3SXY8 428 aa3.33□□□□□ -1.88
APP-207ENST00000415997 ARHGAP29Q52LW3 1261 aa3.33□□□□□ -1.88
APP-207ENST00000415997 RRP12Q5JTH9 1297 aaKnown RBP3.33□□□□□ -1.88
APP-207ENST00000415997 GPATCH4Q5T3I0 446 aaKnown RBP3.33□□□□□ -1.88
APP-207ENST00000415997 NAIF1Q69YI7 327 aaPredicted RBP3.33□□□□□ -1.88
APP-207ENST00000415997 FUT10Q6P4F1 479 aa3.33□□□□□ -1.88
APP-207ENST00000415997 SPNS3Q6ZMD2 512 aa3.33□□□□□ -1.88
APP-207ENST00000415997 USP49Q70CQ1 688 aa3.33□□□□□ -1.88
APP-207ENST00000415997 ADGRE4PQ86SQ3 457 aa3.33□□□□□ -1.88
APP-207ENST00000415997 SLC41A1Q8IVJ1 513 aa3.33□□□□□ -1.88
APP-207ENST00000415997 DHX40Q8IX18 779 aaKnown RBP3.33□□□□□ -1.88
APP-207ENST00000415997 GSPT2Q8IYD1 628 aaKnown RBP3.33□□□□□ -1.88
APP-207ENST00000415997 ADGRF4Q8IZF3 695 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms