RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 VAPBO95292 243 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 CYP3A7P24462 503 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 FDFT1P37268 417 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 RFX3P48380 749 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 DMPKQ09013 629 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 MGAT5Q09328 741 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 ARHGAP17Q68EM7 881 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
SCN1B-202ENST00000415950 KCTD17Q8N5Z5 321 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 ANKRD27Q96NW4 1050 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 LGMNQ99538 433 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 CATSPERBQ9H7T0 1116 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 CRLS1Q9UJA2 301 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 TRMT6Q9UJA5 497 aaKnown RBP13.17□□□□□ -0.3
SCN1B-202ENST00000415950 STXBP5LQ9Y2K9 1186 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 GAKO14976 1311 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 ATXN2Q99700 1313 aaKnown RBP13.17□□□□□ -0.3
SCN1B-202ENST00000415950 M0R2N6 131 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 MTSS1O43312 755 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 MFN2O95140 757 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 IL18RAPO95256 599 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 APOA4P06727 396 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 PPM1JQ5JR12 505 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 TXNRD3NBQ6F5E7 133 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 SAPCD2Q86UD0 394 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 PARP8Q8N3A8 854 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 CAB39LQ9H9S4 337 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 GALNT8Q9NY28 637 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 WRAP73Q9P2S5 460 aaPredicted RBP13.17□□□□□ -0.3
SCN1B-202ENST00000415950 DOLKQ9UPQ8 538 aa13.17□□□□□ -0.3
SCN1B-202ENST00000415950 HEATR9A2RTY3 570 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 ANXA9O76027 345 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 MICAL2O94851 1124 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 CYP3A4P08684 503 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 ME2P23368 584 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 CDC16Q13042 620 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 ZACNQ401N2 412 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 FAM156AQ8NDB6 213 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 NRDE2Q9H7Z3 1164 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 NUDT5Q9UKK9 219 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 PCSK1P29120 753 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 FOLH1Q04609 750 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 KYAT1Q16773 422 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 BMT2Q1RMZ1 405 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 HYIQ5T013 277 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 TSHZ1Q6ZSZ6 1077 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 STK32CQ86UX6 486 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 B3GALNT2Q8NCR0 500 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 OR52K1Q8NGK4 314 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 SYT15Q9BQS2 421 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 PEX11AO75192 247 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 CD4P01730 458 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 OR1G1P47890 313 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 EIF2B2P49770 351 aaKnown RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 GDF10P55107 478 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 VAC14Q08AM6 782 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 CSTF3Q12996 717 aaKnown RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 NBPF12Q5TAG4 269 aaPredicted RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 WDR60Q8WVS4 1066 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 RMND5BQ96G75 393 aaPredicted RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 VCPIP1Q96JH7 1222 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 FOPNLQ96NB1 174 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 NMRK2Q9NPI5 230 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 ETNK2Q9NVF9 386 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 PEAK1Q9H792 1746 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 BCL10O95999 233 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 VDRP11473 427 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 CETPP11597 493 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 TPP2P29144 1249 aaPredicted RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 SKIV2L2P42285 1042 aaKnown RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 ANO7Q6IWH7 933 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 MRNIPQ6NTE8 343 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 UNC5AQ6ZN44 842 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 C10orf107Q8IVU9 208 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 MAGEC3Q8TD91 643 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 CPT1BQ92523 772 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 GORASP1Q9BQQ3 440 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 NOL6Q9H6R4 1146 aaKnown RBP13.16□□□□□ -0.3
SCN1B-202ENST00000415950 DYRK4Q9NR20 520 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 STMN3Q9NZ72 180 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
SCN1B-202ENST00000415950 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 MAGEB2O15479 319 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 BUD23O43709 281 aaKnown RBP13.15□□□□□ -0.3
SCN1B-202ENST00000415950 CYP2B6P20813 491 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 GP5P40197 560 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCN1B-202ENST00000415950 HTR3CQ8WXA8 447 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 RCN3Q96D15 328 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 EBF4Q9BQW3 602 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms