RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SYCE2Q6PIF2 218 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 C14orf80Q86SX3 495 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 EFHBQ8N7U6 833 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 NETO2Q8NC67 525 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 ITFG1Q8TB96 612 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 FAF2Q96CS3 445 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 DDX47Q9H0S4 455 aaKnown RBP16.02■□□□□ 0.15
SHMT2-202ENST00000414700 NEU3Q9UQ49 428 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 HBS1LQ9Y450 684 aaKnown RBP16.02■□□□□ 0.15
SHMT2-202ENST00000414700 CPQQ9Y646 472 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 MAP3K6O95382 1288 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 APOEP02649 317 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 CEBPBP17676 345 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 MS4A13Q5J8X5 152 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 GPR158Q5T848 1215 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 NADSYN1Q6IA69 706 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 NPNTQ6UXI9 565 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 TMEM184AQ6ZMB5 413 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 EP400NLQ6ZTU2 488 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 DENND1CQ8IV53 801 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 MMGT1Q8N4V1 131 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 PLD5Q8N7P1 536 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 C1orf54Q8WWF1 131 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 MYEOVQ96EZ4 313 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 ZSWIM3Q96MP5 696 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 HAPLN3Q96S86 360 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 CCL26Q9Y258 94 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 GOLGA6L7A0A1B0GV03 622 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 TBX10O75333 385 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 TJP3O95049 919 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 SLC2A3P11169 496 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 PECAM1P16284 738 aaPredicted RBP16.01■□□□□ 0.15
SHMT2-202ENST00000414700 ARL4AP40617 200 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 CETN2P41208 172 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 COG7P83436 770 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 ELMSAN1Q6PJG2 1045 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 RFX8Q6ZV50 586 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 KLHL7Q8IXQ5 586 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 BTN2A3PQ96KV6 586 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 RUFY1Q96T51 708 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 NAP1L3Q99457 506 aaPredicted RBP16.01■□□□□ 0.15
SHMT2-202ENST00000414700 OSBPL2Q9H1P3 480 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 SLITRK6Q9H5Y7 841 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 CLEC1BQ9P126 229 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 VANGL2Q9ULK5 521 aa16.01■□□□□ 0.15
SHMT2-202ENST00000414700 DOCK8Q8NF50 2099 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 EEF2KO00418 725 aaKnown RBP16■□□□□ 0.15
SHMT2-202ENST00000414700 GREM1O60565 184 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 PAPLNO95428 1278 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 POU2F2P09086 479 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 IGFBP4P22692 258 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 MLLT6P55198 1093 aaPredicted RBP16■□□□□ 0.15
SHMT2-202ENST00000414700 TPI1P60174 286 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 ADAM15Q13444 863 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 DPYSQ14117 519 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 RAP1GAP2Q684P5 730 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 NUGGCQ68CJ6 796 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 BBS12Q6ZW61 710 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 CCDC33Q8N5R6 958 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 RIN3Q8TB24 985 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 MAK16Q9BXY0 300 aaKnown RBP16■□□□□ 0.15
SHMT2-202ENST00000414700 EFR3BQ9Y2G0 817 aa16■□□□□ 0.15
SHMT2-202ENST00000414700 MRPS23Q9Y3D9 190 aaKnown RBP16■□□□□ 0.15
SHMT2-202ENST00000414700 TRAV19A0A0A6YYK7 116 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 EPHB2P29323 1055 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 CORO1AP31146 461 aaKnown RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 KPNA1P52294 538 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 ITIH3Q06033 890 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 SNX1Q13596 522 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 FAM133BQ5BKY9 247 aaKnown RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 TTMPQ5BVD1 217 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 MANEALQ5VSG8 457 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 SLC9A4Q6AI14 798 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 ANKRD54Q6NXT1 300 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 TTC27Q6P3X3 843 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 RFWD3Q6PCD5 774 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 ZNF683Q8IZ20 524 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 CMTM8Q8IZV2 173 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 ATP6V0D2Q8N8Y2 350 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 LRRN4Q8WUT4 740 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 KRT12Q99456 494 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 DZANK1Q9NVP4 752 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 LMCD1Q9NZU5 365 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 GGA2Q9UJY4 613 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 MYOFQ9NZM1 2061 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 TMEM265A0A087WTH1 108 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 E9PAM4 449 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 PRAMEF12O95522 483 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 ERCC2P18074 760 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 SLC6A4P31645 630 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 KCNJ1P48048 391 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 HARS2P49590 506 aaKnown RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 SLC7A9P82251 487 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 GBE1Q04446 702 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 SLC10A2Q12908 348 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 AUHQ13825 339 aaKnown RBP15.99■□□□□ 0.15
SHMT2-202ENST00000414700 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 NCBP2-AS2Q69YL0 99 aa15.99■□□□□ 0.15
SHMT2-202ENST00000414700 TTC19Q6DKK2 380 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms