RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ATP5F1P24539 256 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 PCP4P48539 62 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 CCT5P48643 541 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 AARSP49588 968 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 ACTR2P61160 394 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 YPEL5P62699 121 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 CCDC142Q17RM4 750 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 FBXO47Q5MNV8 452 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 SLC18B1Q6NT16 456 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 DEF8Q6ZN54 512 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 RTL10Q7L3V2 364 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 YTHDF3Q7Z739 585 aaKnown RBP4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 RHPN2Q8IUC4 686 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 PAQR4Q8N4S7 273 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 PTGR2Q8N8N7 351 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 OR52N4Q8NGI2 321 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 DDB2Q92466 427 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 PIGKQ92643 395 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 KTI12Q96EK9 354 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 ABHD14AQ9BUJ0 271 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 QTRT1Q9BXR0 403 aaKnown RBP4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 SEPSECSQ9HD40 501 aaKnown RBP4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 TXNRD2Q9NNW7 524 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 ITM2CQ9NQX7 267 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 SLC22A11Q9NSA0 550 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 LUZP4Q9P127 313 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 KCND3Q9UK17 655 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 FEM1BQ9UK73 627 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 BAG5Q9UL15 447 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 PCDHA10Q9Y5I2 948 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 ARID4BQ4LE39 1312 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 AGAP5A6NIR3 686 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 C2CD4BA6NLJ0 364 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 E5RJQ4 531 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 TP73O15350 636 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 CD63P08962 238 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 ALDOCP09972 364 aaKnown RBP4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 PEPDP12955 493 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 CHN1P15882 459 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 SLC12A2P55011 1212 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 SHC2P98077 582 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 GHRHRQ02643 423 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 RNASELQ05823 741 aaKnown RBP4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 MTA1Q13330 715 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 TAF5Q15542 800 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 ANXA2RQ3ZCQ2 193 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 SUPT20HL1Q3ZLR7 823 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 EARS2Q5JPH6 523 aaKnown RBP4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 PAPD7Q5XG87 772 aaKnown RBP4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 SYT13Q7L8C5 426 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 FTSJ3Q8IY81 847 aaKnown RBP4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 ENDOVQ8N8Q3 282 aaKnown RBP4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 FAM47BQ8NA70 645 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 MYRIPQ8NFW9 859 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 CSGALNACT1Q8TDX6 532 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 GCC1Q96CN9 775 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 SIGLEC11Q96RL6 698 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 SH2D3AQ9BRG2 576 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 MTMR4Q9NYA4 1195 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 KLHL13Q9P2N7 655 aa4.26□□□□□ -1.73
HMGB1P11-201ENST00000413899 ZNF804BA4D1E1 1349 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 LOC102724159A0A0B4J2E5 919 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 SLC22A23A1A5C7 686 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 MCIDASD6RGH6 385 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 SEPT4O43236 478 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 CNOT3O75175 753 aaKnown RBP4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 PRR35P0CG20 571 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 CTSAP10619 480 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 ST6GAL1P15907 406 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 KELP23276 732 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 RBM5P52756 815 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 ADPRHP54922 357 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 RPS13P62277 151 aaKnown RBP4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 MRPS21P82921 87 aaKnown RBP4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 B4GALNT1Q00973 533 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 RAPGEF1Q13905 1077 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 PWP2Q15269 919 aaKnown RBP4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 EZH2Q15910 746 aaKnown RBP4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 MORN5Q5VZ52 161 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 DHRS13Q6UX07 377 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 KIAA1324Q6UXG2 1013 aaKnown RBP4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 MDGA2Q7Z553 956 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 FSIP1Q8NA03 581 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 WIPF2Q8TF74 440 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 GOLGA1Q92805 767 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 KAT2BQ92831 832 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 TRIM63Q969Q1 353 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 RILPL2Q969X0 211 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 SCLT1Q96NL6 688 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 ZNF347Q96SE7 839 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 ARHGAP39Q9C0H5 1083 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 PDE11AQ9HCR9 933 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 RCE1Q9Y256 329 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 BTBD3Q9Y2F9 522 aa4.25□□□□□ -1.73
HMGB1P11-201ENST00000413899 ZNF335Q9H4Z2 1342 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 UNC13AQ9UPW8 1703 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 SAC3D1A6NKF1 404 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 KCNJ18B7U540 433 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 GRM8O00222 908 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms