RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 MRPL45Q9BRJ2 306 aaKnown RBP14.97□□□□□ -0.01
SEMA3F-202ENST00000413852 NIFKQ9BYG3 293 aaKnown RBP14.97□□□□□ -0.01
SEMA3F-202ENST00000413852 VCX3BQ9H321 246 aa14.97□□□□□ -0.01
SEMA3F-202ENST00000413852 DPEP3Q9H4B8 488 aa14.97□□□□□ -0.01
SEMA3F-202ENST00000413852 VCX3AQ9NNX9 186 aa14.97□□□□□ -0.01
SEMA3F-202ENST00000413852 DTLQ9NZJ0 730 aa14.97□□□□□ -0.01
SEMA3F-202ENST00000413852 SSX2IPQ9Y2D8 614 aa14.97□□□□□ -0.01
SEMA3F-202ENST00000413852 COL11A1P12107 1806 aaPredicted RBP14.97□□□□□ -0.01
SEMA3F-202ENST00000413852 BIRC5O15392 142 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 CSPG5O95196 566 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 KLHL2O95198 593 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 TPH1P17752 444 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 SDC4P31431 198 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 MAGEA3P43357 314 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 MYBPC1Q00872 1141 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 SNAPC2Q13487 334 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 NXNQ6DKJ4 435 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 ZFP28Q8NHY6 868 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 TMIGD2Q96BF3 282 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 NUF2Q9BZD4 464 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 NRBP2Q9NSY0 501 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 MAP3K20Q9NYL2 800 aaKnown RBP14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 BCLAF3A2AJT9 711 aaKnown RBP14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 TMEM233B4DJY2 109 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 CREB3O43889 395 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 PDGFRBP09619 1106 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 CPA3P15088 417 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 CNGA3Q16281 694 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 PABPC1LQ4VXU2 614 aaKnown RBP14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 AAGABQ6PD74 315 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 MAP7D3Q8IWC1 876 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 SNRNP27Q8WVK2 155 aaKnown RBP14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 RCN3Q96D15 328 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 SNX15Q9NRS6 342 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 UBP1Q9NZI7 540 aa14.96□□□□□ -0.01
SEMA3F-202ENST00000413852 H3BSA7 217 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 FBXO21O94952 628 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 PTPRAP18433 802 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 PDCD2Q16342 344 aaPredicted RBP14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 SOWAHAQ2M3V2 549 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 HEATR6Q6AI08 1181 aaKnown RBP14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 SLC9A4Q6AI14 798 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 ARCQ7LC44 396 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 ZBTB8OSQ8IWT0 167 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 OR52K1Q8NGK4 314 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 ABTB1Q969K4 478 aaPredicted RBP14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 PKP2Q99959 881 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 GMPR2Q9P2T1 348 aaKnown RBP14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 ITGA11Q9UKX5 1188 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 AP4B1Q9Y6B7 739 aa14.96□□□□□ -0.02
SEMA3F-202ENST00000413852 PTPRFP10586 1907 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 CLPTM1O96005 669 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 ASLP04424 464 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 HDCP19113 662 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 ADORA2BP29275 332 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 WDR78Q5VTH9 848 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 OLFML1Q6UWY5 402 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 RPS27LQ71UM5 84 aaKnown RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 SDCCAG8Q86SQ7 713 aaPredicted RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 FAM110BQ8TC76 370 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 NPAS2Q99743 824 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 TEX13BQ9BXU2 312 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 SUDS3Q9H7L9 328 aaPredicted RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 GBA2Q9HCG7 927 aaPredicted RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 ZDHHC7Q9NXF8 308 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 GINS2Q9Y248 185 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 RPS6KL1Q9Y6S9 549 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 COMMD3-BMI1R4GMX3 469 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 MFSD11O43934 449 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 FOXD2O60548 495 aaPredicted RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 SRGAP2BP0DMP2 458 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 PTPN1P18031 435 aaKnown RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 NIPAL4Q0D2K0 466 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 GRM2Q14416 872 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 ZNF460Q14592 562 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 GLRA4Q5JXX5 417 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 PQLC1Q8N2U9 271 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 BHLHE22Q8NFJ8 381 aaPredicted RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 CEP70Q8NHQ1 597 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 TMA16Q96EY4 203 aaKnown RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 PRICKLE1Q96MT3 831 aaPredicted RBP14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 FER1L6Q2WGJ9 1857 aa14.95□□□□□ -0.02
SEMA3F-202ENST00000413852 TK2O00142 265 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 ONECUT3O60422 494 aaPredicted RBP14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 GALK1P51570 392 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 MTTPP55157 894 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 RTKN2Q8IZC4 609 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 NME8Q8N427 588 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 TDRD5Q8NAT2 981 aaKnown RBP14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 ZNF280CQ8ND82 737 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 CXorf38Q8TB03 319 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 CDHR1Q96JP9 859 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 OLFM3Q96PB7 478 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 CSPG4P5Q96PW8 444 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 PTPRHQ9HD43 1115 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 HESX1Q9UBX0 185 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 SNX9Q9Y5X1 595 aa14.94□□□□□ -0.02
SEMA3F-202ENST00000413852 ATP9BO43861 1147 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms