RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ACADVLP49748 655 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 CLDN6P56747 220 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 C9orf64Q5T6V5 341 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 NUGGCQ68CJ6 796 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 PMF1Q6P1K2 205 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 NCEH1Q6PIU2 408 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 LCLAT1Q6UWP7 414 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 KRBA2Q6ZNG9 492 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 GATAD2AQ86YP4 633 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 MFN1Q8IWA4 741 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 UNC45BQ8IWX7 931 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 SIX6OS1Q8N1H7 587 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 UBA3Q8TBC4 463 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 ADAM32Q8TC27 787 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 IRGQQ8WZA9 623 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 TFAP2BQ92481 460 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 FAM131CQ96AQ9 280 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 ZSWIM1Q9BR11 485 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 NEUROG2Q9H2A3 272 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 FZD4Q9ULV1 537 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 PTPRQQ9UMZ3 2332 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 A0A1W2PP55 124 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 ENC1O14682 589 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 TLX3O43711 291 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-210ENST00000413578 FYNP06241 537 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 CDK4P11802 303 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 EPHA8P29322 1005 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-210ENST00000413578 CSKP41240 450 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 ABCG1P45844 678 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 CCR5P51681 352 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 C21orf59P57076 290 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 DNAJC3Q13217 504 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 CST6Q15828 149 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 FSCBQ5H9T9 825 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 PRAMEF14Q5SWL7 426 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 ADAT2Q7Z6V5 191 aaKnown RBP12.62□□□□□ -0.39
LIMS2-210ENST00000413578 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-210ENST00000413578 AADATQ8N5Z0 425 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 HJURPQ8NCD3 748 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-210ENST00000413578 OR2T34Q8NGX1 318 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 CCDC47Q96A33 483 aaKnown RBP12.62□□□□□ -0.39
LIMS2-210ENST00000413578 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 SLC39A13Q96H72 371 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 FCRL2Q96LA5 508 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-210ENST00000413578 UBL7Q96S82 380 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-210ENST00000413578 FAM129BQ96TA1 746 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 GOLPH3LQ9H4A5 285 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 PRORYQ9H606 182 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 KIAA1257Q9ULG3 409 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 NCKAP1Q9Y2A7 1128 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 CFAP46Q8IYW2 2715 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 KALRNO60229 2985 aa12.62□□□□□ -0.39
LIMS2-210ENST00000413578 ASH1LQ9NR48 2969 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 LRRC72A6NJI9 287 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 TTC34A8MYJ7 566 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 CETN3O15182 167 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 SLC16A3O15427 465 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 YKT6O15498 198 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 LATO43561 262 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 RFPL3O75679 317 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 C1QL1O75973 258 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 LTFP02788 710 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 PAEPP09466 180 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 EPB41P11171 864 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 LCP1P13796 627 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 CD19P15391 556 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 ITPKBP27987 946 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 CD38P28907 300 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 EIF2S3P41091 472 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 CTSOP43234 321 aaPredicted RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 RPL34P49207 117 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 SLC11A2P49281 568 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 TBX4P57082 545 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 NXPH1P58417 271 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 ST8SIA6P61647 398 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 RPS24P62847 133 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 NNTQ13423 1086 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 RTP5Q14D33 572 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 COBLL1Q53SF7 1204 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 SFMBT2Q5VUG0 894 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 FBXL19Q6PCT2 694 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 MMS22LQ6ZRQ5 1243 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 KANSL1Q7Z3B3 1105 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 DHX40Q8IX18 779 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 CLEC4CQ8WTT0 213 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 SLC35C1Q96A29 364 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 CNDP2Q96KP4 475 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 TPX2Q9ULW0 747 aaKnown RBP12.61□□□□□ -0.39
LIMS2-210ENST00000413578 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 TMEM131Q92545 1883 aa12.61□□□□□ -0.39
LIMS2-210ENST00000413578 A0A1W2PQ27 194 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 A0A1W2PQ64 194 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 FAM47DPA6NHR8 397 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 TK2O00142 265 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 RNASEH1O60930 286 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms