RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 SLC9A1P19634 815 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 ZNF445P59923 1031 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 PAK1Q13153 545 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 SLC14A1Q13336 389 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 STILQ15468 1287 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 KIF19Q2TAC6 998 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 HLA-BQ31612 363 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 ZC3H12AQ5D1E8 599 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 NUGGCQ68CJ6 796 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 CIR1Q86X95 450 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 UNC45BQ8IWX7 931 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 APCDD1Q8J025 514 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 CARNMT1Q8N4J0 409 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 BAHD1Q8TBE0 780 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 ZNF606Q8WXB4 792 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 SNX19Q92543 992 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 AZIN2Q96A70 460 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 FAM149B1Q96BN6 582 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 GTPBP4Q9BZE4 634 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 TOR4AQ9NXH8 423 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 PCOLCE2Q9UKZ9 415 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 TLR6Q9Y2C9 796 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 SNX11Q9Y5W9 270 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 FAM208BQ5VWN6 2430 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 FAM221BA6H8Z2 402 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 C10orf142B7Z368 130 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 SEMA4FO95754 770 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 IGHV4-34P06331 123 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 FTH1P19P0C7X4 201 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 KRT5P13647 590 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 SLC11A2P49281 568 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 IRAK1P51617 712 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 RAP1GAP2Q684P5 730 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 DBX2Q6ZNG2 339 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 MARCH9Q86YJ5 346 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 HJURPQ8NCD3 748 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 OR52K2Q8NGK3 314 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 RSPH9Q9H1X1 276 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 TM9SF3Q9HD45 589 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 TM7SF3Q9NS93 570 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 SLCO3A1Q9UIG8 710 aa17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 HOOK1Q9UJC3 728 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCAMP4-203ENST00000411971 BICDL2A1A5D9 508 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 IRAK2O43187 625 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 VAV1P15498 845 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 PPP1R2P41236 205 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 STK19P49842 368 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 METAP1P53582 386 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 BECN1Q14457 450 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 PITRM1Q5JRX3 1037 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 C9orf64Q5T6V5 341 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 TMEM110Q86TL2 294 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 LGI2Q8N0V4 545 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 ZCCHC14Q8WYQ9 949 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 SERPINB11Q96P15 392 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 FAM129BQ96TA1 746 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 PRMT1Q99873 361 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 ZDHHC5Q9C0B5 715 aa17.09■□□□□ 0.33
SCAMP4-203ENST00000411971 ANKRD11Q6UB99 2663 aaPredicted RBP17.08■□□□□ 0.33
SCAMP4-203ENST00000411971 GOLGA4Q13439 2230 aaKnown RBP17.08■□□□□ 0.33
SCAMP4-203ENST00000411971 WNT9AO14904 365 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 MID1O15344 667 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 THAP12O43422 761 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 FSBPO95073 299 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 TRUB2O95900 331 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 ATP5BP06576 529 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 PNMA6AP0CW24 399 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 TACR2P21452 398 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 MATKP42679 507 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 NNTQ13423 1086 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 KCNJ12Q14500 433 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 CAMK4Q16566 473 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 ARHGAP44Q17R89 818 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 HNRNPA1L2Q32P51 320 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 ZNF776Q68DI1 518 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 DPY19L2P1Q6NXN4 242 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 TRIM65Q6PJ69 517 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 ADAMTS14Q8WXS8 1223 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 RPL10LQ96L21 214 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 BTBD1Q9H0C5 482 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 PABPC3Q9H361 631 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 SIX2Q9NPC8 291 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 ERVW-1Q9UQF0 538 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 ITPR1Q14643 2758 aa17.08■□□□□ 0.32
SCAMP4-203ENST00000411971 FAM170AA1A519 330 aa17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 GRAP2O75791 330 aa17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 LUC7L3O95232 432 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 DNTTP04053 509 aa17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 WNT1P04628 370 aa17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 ATXN1LP0C7T5 689 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 HOXB3P14651 431 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 MZF1P28698 734 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 GNA15P30679 374 aa17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 GGCXP38435 758 aa17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 CETN1Q12798 172 aa17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 PDCLQ13371 301 aa17.07■□□□□ 0.32
SCAMP4-203ENST00000411971 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms