RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 FAM72CH0Y354 149 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 ENDOD1O94919 500 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 LUC7L3O95232 432 aaKnown RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 PABPC1P11940 636 aaKnown RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 HLA-EP13747 358 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 HNRNPH3P31942 346 aaKnown RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 PTPN9P43378 593 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF143P52747 638 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 FUT11Q495W5 492 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 PREPLQ4J6C6 727 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 FAM72AQ5TYM5 149 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 ANO7Q6IWH7 933 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 FAM72DQ6L9T8 149 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 NUDT18Q6ZVK8 323 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 FAM72BQ86X60 149 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 APCDD1Q8J025 514 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 CCAR2Q8N163 923 aaKnown RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 PYROXD2Q8N2H3 581 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 VCPIP1Q96JH7 1222 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 SLC2A11Q9BYW1 496 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 TPSD1Q9BZJ3 242 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 ZNHIT6Q9NWK9 470 aaKnown RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 INTS6Q9UL03 887 aaKnown RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 MMP17Q9ULZ9 603 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 ANKRD62A6NC57 917 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 PSMA2P25787 234 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 MZF1P28698 734 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 ADRA1BP35368 520 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 IL12RB1P42701 662 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF252P-AS1Q0IIN9 211 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 CRY1Q16526 586 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 LPAL2Q16609 132 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 MBLAC2Q68D91 279 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 KIAA1211LQ6NV74 962 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 TFAP2DQ7Z6R9 452 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 FIBINQ8TAL6 211 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 CENPIQ92674 756 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-202ENST00000411739 ACDQ96AP0 544 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 LMLNQ96KR4 655 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 SLC6A17Q9H1V8 727 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 DEF6Q9H4E7 631 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 MTG2Q9H4K7 406 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 GPATCH2LQ9NWQ4 482 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 STARD13Q9Y3M8 1113 aa12.36□□□□□ -0.43
NEDD1-202ENST00000411739 TMEM191CA6NGB0 347 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 CSKP41240 450 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 GALCP54803 685 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF234Q14588 700 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 MPP7Q5T2T1 576 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 ARTNQ5T4W7 220 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 ARFGAP1Q8N6T3 406 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 TC2NQ8N9U0 490 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 TSTD1Q8NFU3 115 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 ATRIPQ8WXE1 791 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 IER2Q9BTL4 223 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 NHEJ1Q9H9Q4 299 aaPredicted RBP12.35□□□□□ -0.43
NEDD1-202ENST00000411739 PCSK1NQ9UHG2 260 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 STON1Q9Y6Q2 735 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 TCRBV21S2A2A0A5A6 115 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 E9PAM4 449 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 AKR1B10O60218 316 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 HOXB2P14652 356 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 NTSR1P30989 418 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 DGKEP52429 567 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 ASTE1Q2TB18 679 aaPredicted RBP12.35□□□□□ -0.43
NEDD1-202ENST00000411739 RABGAP1LQ5R372 815 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 STRADAQ7RTN6 431 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF683Q8IZ20 524 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 HMGB4Q8WW32 186 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 CNPY3Q9BT09 278 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 ZSCAN32Q9NX65 697 aa12.35□□□□□ -0.43
NEDD1-202ENST00000411739 DCLK1O15075 740 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 HRO43593 1189 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 PRKCHP24723 683 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 EOGTQ5NDL2 527 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 RNF43Q68DV7 783 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 CXorf57Q6NSI4 855 aaKnown RBP12.34□□□□□ -0.43
NEDD1-202ENST00000411739 CACUL1Q86Y37 369 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 CCDC117Q8IWD4 279 aaPredicted RBP12.34□□□□□ -0.43
NEDD1-202ENST00000411739 DRC7Q8IY82 874 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 PGBD3Q8N328 593 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 FRMD1Q8N878 549 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 SPC24Q8NBT2 197 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 RPL10LQ96L21 214 aaKnown RBP12.34□□□□□ -0.43
NEDD1-202ENST00000411739 OR12D3Q9UGF7 316 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 ZFHX2Q9C0A1 2572 aaPredicted RBP12.34□□□□□ -0.43
NEDD1-202ENST00000411739 A0A1W2PQF6 199 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 TCF4P15884 667 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 POLR2EP19388 210 aaKnown RBP12.34□□□□□ -0.43
NEDD1-202ENST00000411739 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 PTPRNQ16849 979 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF528Q3MIS6 628 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 FNDC3BQ53EP0 1204 aaKnown RBP12.34□□□□□ -0.43
NEDD1-202ENST00000411739 PITRM1Q5JRX3 1037 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms