RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 NPIPB11E5RHQ5 1161 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 AGPSO00116 658 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 SLC16A6O15403 523 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 PDE8AO60658 829 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 ATP1A1P05023 1023 aaKnown RBP1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 KCNA5P22460 613 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 MARK3P27448 753 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 ZNF132P52740 706 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 MRPS5P82675 430 aaKnown RBP1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 KIF23Q02241 960 aaPredicted RBP1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 DMWDQ09019 674 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 SREBF2Q12772 1141 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 MYBPHQ13203 477 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 TCTEX1D4Q5JR98 221 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 ZNF343Q6P1L6 599 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 ERC1Q8IUD2 1116 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 CHPFQ8IZ52 775 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 FGFBP3Q8TAT2 258 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 AKAP1Q92667 903 aaKnown RBP eCLIP1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 C17orf77Q96MU5 243 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 LMBRD1Q9NUN5 540 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 STEAP1Q9UHE8 339 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 CPA4Q9UI42 421 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 PLAAQ9Y263 795 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 WASHC2AQ641Q2 1341 aa1.33□□□□□ -2.2
RNU4-61P-201ENST00000411243 NDUFAF8A1L188 74 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 TTC34A8MYJ7 566 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 SERPINI2O75830 405 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 ENO1P06733 434 aaKnown RBP1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 HGFP14210 728 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 GATMP50440 423 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 EIF4A1P60842 406 aaKnown RBP1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 STRN3Q13033 797 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 CLUL1Q15846 466 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 UGP2Q16851 508 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 THEMIS2Q5TEJ8 643 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 ADGRA1Q86SQ6 560 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 CDC20BQ86Y33 519 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 FGFRL1Q8N441 504 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 SERPINB13Q9UIV8 391 aa1.32□□□□□ -2.2
RNU4-61P-201ENST00000411243 PRKNO60260 465 aaPredicted RBP1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 THP07101 528 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 PARP1P09874 1014 aaKnown RBP1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 GNLYP22749 145 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 DUSP1P28562 367 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 PGDP52209 483 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 ANXA2RQ3ZCQ2 193 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 GLE1Q53GS7 698 aaKnown RBP1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 XKR4Q5GH76 650 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 GRHL2Q6ISB3 625 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 C16orf86Q6ZW13 317 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 USP49Q70CQ1 688 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 ADIPOR2Q86V24 386 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 CAMK1DQ8IU85 385 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 C11orf44Q8N8P7 122 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 BICD2Q8TD16 824 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 SNX27Q96L92 541 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 RBM4BQ9BQ04 359 aaKnown RBP1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 EBF2Q9HAK2 575 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 FBRSL1Q9HCM7 1045 aaKnown RBP1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 ABCB10Q9NRK6 738 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 PNPOQ9NVS9 261 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 ZSCAN32Q9NX65 697 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 GABBR1Q9UBS5 961 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 SLC8A2Q9UPR5 921 aa1.31□□□□□ -2.2
RNU4-61P-201ENST00000411243 TUBBP07437 444 aa1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 SLC3A2P08195 630 aaKnown RBP1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 CLCN3P51790 818 aa1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 TUBB4BP68371 445 aa1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 TBX2Q13207 712 aaPredicted RBP1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 ENTPD8Q5MY95 495 aa1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 DDX46Q7L014 1031 aaKnown RBP1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 ZNF584Q8IVC4 421 aa1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 SLC15A4Q8N697 577 aa1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 KDM1BQ8NB78 822 aa1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 CDK11AQ9UQ88 783 aaPredicted RBP1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 RAI2Q9Y5P3 530 aa1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.3□□□□□ -2.2
RNU4-61P-201ENST00000411243 IGHV4-28A0A0C4DH34 117 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 FAM227AF5H4B4 570 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 K7ESF4 209 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 SORBS2O94875 1100 aaKnown RBP1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 HNRNPA1P09651 372 aaKnown RBP eCLIP1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 CETPP11597 493 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 C21orf33P30042 268 aaPredicted RBP1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 PEX5P50542 639 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 LRMPQ12912 555 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 CAPRIN1Q14444 709 aaKnown RBP1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 ZNF284Q2VY69 593 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 SOGA3Q5TF21 947 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 FAAP20Q6NZ36 180 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 CYB5R4Q7L1T6 521 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 HOMER1Q86YM7 354 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 OR52N4Q8NGI2 321 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 RAPGEF4Q8WZA2 1011 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 KAT2AQ92830 837 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 KLHL29Q96CT2 875 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 LINC00167Q96N53 147 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 VGLL1Q99990 258 aa1.29□□□□□ -2.2
RNU4-61P-201ENST00000411243 TRIM2Q9C040 744 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms