RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 DUSP23Q9BVJ7 150 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 DNAI2Q9GZS0 605 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 XYLT2Q9H1B5 865 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC25A18Q9H1K4 315 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 SMYD3Q9H7B4 428 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 VRTNQ9H8Y1 702 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 EBF2Q9HAK2 575 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 USP29Q9HBJ7 922 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 LRRC4CQ9HCJ2 640 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 PNPLA8Q9NP80 782 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM49BQ9NUQ9 324 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 ABCB8Q9NUT2 735 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 PANK4Q9NVE7 773 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 KLHL11Q9NVR0 708 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 WDR70Q9NW82 654 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 MARCH2Q9P0N8 246 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBC1D7Q9P0N9 293 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TJP2Q9UDY2 1190 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 STK17AQ9UEE5 414 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCDC39Q9UFE4 941 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 SERGEFQ9UGK8 458 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 GGA2Q9UJY4 613 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 AGO1Q9UL18 857 aaKnown RBP2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 ATXN7L1Q9ULK2 861 aaPredicted RBP2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 FZD4Q9ULV1 537 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 LIMCH1Q9UPQ0 1083 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 SATB2Q9UPW6 733 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 PAXBP1Q9Y5B6 917 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 F8P00451 2351 aa2.46□□□□□ -2.01
RNU4-53P-201ENST00000410828 DENND4CQ5VZ89 1909 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 MYO16Q9Y6X6 1858 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 EDDM13A0A1B0GTR0 161 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TYW5A2RUC4 315 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CPED1A4D0V7 1026 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 EME2A4GXA9 379 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 C10orf142B7Z368 130 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 HHLA1C9JL84 531 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 H3BQV1 296 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 K7ESM1 405 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SCAMP1O15126 338 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 MID1O15344 667 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC7A4O43246 635 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 EFSO43281 561 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 EIF5BO60841 1220 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TBL1XO60907 577 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SIN3BO75182 1162 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TCEA3O75764 348 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PIAS2O75928 621 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 KIF20AO95235 890 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 MOCS3O95396 460 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 LATS1O95835 1130 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ADH1BP00325 375 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 IL1BP01584 269 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 RPN1P04843 607 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SRPRAP08240 638 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 THEGLP0DJG4 465 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 HOXD9P28356 352 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TXLNAP40222 546 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 NNMTP40261 264 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CASRP41180 1078 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCR10P46092 362 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PSMD8P48556 350 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC11A2P49281 568 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ADPRHP54922 357 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC8A3P57103 927 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 HNRNPKP61978 463 aaKnown RBP eCLIP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 YWHAGP61981 247 aaKnown RBP eCLIP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SNRPFP62306 86 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPP2CBP62714 309 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPP2CAP67775 309 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 FOXK1P85037 733 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CYP24A1Q07973 514 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 EHHADHQ08426 723 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 KCNMA1Q12791 1236 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 EIF3IQ13347 325 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF177Q13360 481 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 BIRC3Q13489 604 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 NCOA4Q13772 614 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ELAVL3Q14576 367 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ARID5BQ14865 1188 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PSMD6Q15008 389 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TRIP4Q15650 581 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CDKN3Q16667 212 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SGSM1Q2NKQ1 1148 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SETMARQ53H47 684 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ADGRF1Q5T601 910 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 C9orf64Q5T6V5 341 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 FAM46CQ5VWP2 391 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 RRAGBQ5VZM2 374 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZCCHC8Q6NZY4 707 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 FOXR1Q6PIV2 292 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SCARA5Q6ZMJ2 495 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 RBM44Q6ZP01 1051 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCDC73Q6ZRK6 1079 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLEC20AQ6ZU45 233 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMC6Q7Z403 805 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 KIAA0907Q7Z7F0 614 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 DSG4Q86SJ6 1040 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms