RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TAF2Q6P1X5 1199 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 CLEC9AQ6UXN8 241 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 CCDC186Q7Z3E2 898 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 KRT27Q7Z3Y8 459 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 BRSK2Q8IWQ3 736 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 TDRD5Q8NAT2 981 aaKnown RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 ZFP28Q8NHY6 868 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 SH3RF3Q8TEJ3 882 aaPredicted RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 VPS33AQ96AX1 596 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ARRDC3Q96B67 414 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 PHACTR3Q96KR7 559 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 RPL10LQ96L21 214 aaKnown RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 C5orf34Q96MH7 638 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 CMTM3Q96MX0 182 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 TRIB1Q96RU8 372 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 LBHD1Q9BQE6 289 aaPredicted RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 HTATIP2Q9BUP3 242 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 PTDSS2Q9BVG9 487 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 KCNK9Q9NPC2 374 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ARHGEF3Q9NR81 526 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 GIMAP4Q9NUV9 329 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 FBXO28Q9NVF7 368 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 CPSF2Q9P2I0 782 aaKnown RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 CD207Q9UJ71 328 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ANAPC5Q9UJX4 755 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 SLC27A6Q9Y2P4 619 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 UBE2J1Q9Y385 318 aaPredicted RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 ZDHHC9Q9Y397 364 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 PCDHB7Q9Y5E2 793 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 PCDHA10Q9Y5I2 948 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 A0A1W2PQM1 296 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 FRMD3A2A2Y4 597 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 GLOD5A6NK44 160 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 PATE3B3GLJ2 98 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 TEX22C9J3V5 150 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 M0QYT0 321 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 SYN3O14994 580 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 GGPS1O95749 300 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 CFIP05156 583 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 ITGB1P05556 798 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 URODP06132 367 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 YY1P25490 414 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 EPHA3P29320 983 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 PPIFP30405 207 aaKnown RBP5.24□□□□□ -1.57
LSM5-205ENST00000409952 MSX2P35548 267 aaPredicted RBP5.24□□□□□ -1.57
LSM5-205ENST00000409952 PBX3P40426 434 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 CAPZA2P47755 286 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 PCP4P48539 62 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 EIF4A1P60842 406 aaKnown RBP5.24□□□□□ -1.57
LSM5-205ENST00000409952 TMEM115Q12893 351 aaPredicted RBP5.24□□□□□ -1.57
LSM5-205ENST00000409952 ACAP1Q15027 740 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 SLC9B1Q4ZJI4 515 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 KRTCAP3Q53RY4 240 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 CCDC158Q5M9N0 1113 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 ANKRD40Q6AI12 368 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 ADALQ6DHV7 355 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 CCDC144NLQ6NUI1 221 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 SARM1Q6SZW1 724 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 CHST9Q7L1S5 443 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 CATSPER4Q7RTX7 472 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 LIMS2Q7Z4I7 341 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 PRRT2Q7Z6L0 340 aaPredicted RBP5.24□□□□□ -1.57
LSM5-205ENST00000409952 GPR149Q86SP6 731 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 MON1AQ86VX9 555 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 DNAAF5Q86Y56 855 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 SLC15A3Q8IY34 581 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 TMCO5AQ8N6Q1 288 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 POGLUT1Q8NBL1 392 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 DEPDC1BQ8WUY9 529 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 SLC22A18Q96BI1 424 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 KLHL29Q96CT2 875 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 ZBTB45Q96K62 511 aaPredicted RBP5.24□□□□□ -1.57
LSM5-205ENST00000409952 GPHA2Q96T91 129 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 PI4K2AQ9BTU6 479 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 SH2D4AQ9H788 454 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 NRDE2Q9H7Z3 1164 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 MSL2Q9HCI7 577 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 IL23AQ9NPF7 189 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 CDH22Q9UJ99 828 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 TRPC5Q9UL62 973 aaPredicted RBP5.24□□□□□ -1.57
LSM5-205ENST00000409952 RIMKLBQ9ULI2 386 aa5.24□□□□□ -1.57
LSM5-205ENST00000409952 NDRG4Q9ULP0 352 aaKnown RBP5.24□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3DA0A087WVF3 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3IA0A087WXS9 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3EA0A087X179 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3KA0A087X1G2 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 FAM237BA0A1B0GVD1 139 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3BA6NDS4 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3FA6NER0 549 aaPredicted RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3LB9A6J9 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 C1QTNF3-AMACRE9PGA6 284 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 INO80B-WBP1J3KQ70 363 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 MATN2O00339 956 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 HNRNPCL1O60812 293 aaKnown RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 WDR47O94967 919 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3HP0C7X1 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 FCER1AP12319 257 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 DRD1P21728 446 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 MCM3P25205 808 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms