RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NFKB1P19838 968 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 NCF2P19878 526 aaPredicted RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 IL1R2P27930 398 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 SOX11P35716 441 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 HSD17B3P37058 310 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 IFT88Q13099 833 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 UPP1Q16831 310 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 SLC25A52Q3SY17 297 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 C6orf118Q5T5N4 469 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 LRRTM3Q86VH5 581 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 ZDHHC17Q8IUH5 632 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 HERC6Q8IVU3 1022 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 SEMA3CQ99985 751 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 CDC42EP4Q9H3Q1 356 aaKnown RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 ETNK1Q9HBU6 452 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 PIGVQ9NUD9 493 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 TMLHEQ9NVH6 421 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 ARHGEF38Q9NXL2 777 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 SYNCRIPO60506 623 aaKnown RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 TRIM16O95361 564 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 C1RP00736 705 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 IL1BP01584 269 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 PLEKHA7Q6IQ23 1121 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 PSRC1Q6PGN9 363 aaPredicted RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 SERPINA13PQ6UXR4 307 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 TRIM67Q6ZTA4 783 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 OTOP3Q7RTS5 596 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 CASP10Q92851 521 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 CYTH2Q99418 400 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 ANKZF1Q9H8Y5 726 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 CRLS1Q9UJA2 301 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 STAMBPO95630 424 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 UNGP13051 313 aaPredicted RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 ABL2P42684 1182 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 CXCR3P49682 368 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 NR1H3Q13133 447 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 PTRHD1Q6GMV3 140 aaKnown RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 RETSATQ6NUM9 610 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 DOK6Q6PKX4 331 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 TTC7BQ86TV6 843 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 TMEM173Q86WV6 379 aaPredicted RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
SNX13-202ENST00000409604 DCUN1D1Q96GG9 259 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 IGSF21Q96ID5 467 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 ZFYVE19Q96K21 471 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 SUSD3Q96L08 255 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 C17orf80Q9BSJ5 609 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 MAF1Q9H063 256 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 OSGEPL1Q9H4B0 414 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 BRD9Q9H8M2 597 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 MED4Q9NPJ6 270 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 YIPF1Q9Y548 306 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 MYH10P35580 1976 aa11.69□□□□□ -0.54
SNX13-202ENST00000409604 ASXL3Q9C0F0 2248 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 SLC38A8A6NNN8 435 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 POLBP06746 335 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 SERPINF2P08697 491 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 KCNE1P15382 129 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 PAPOLAP51003 745 aaKnown RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 ADCY2Q08462 1091 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 MAP3K21Q5TCX8 1036 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 VSTM1Q6UX27 236 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 MMGT1Q8N4V1 131 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 SPATA22Q8NHS9 363 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 SH3KBP1Q96B97 665 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 CALR3Q96L12 384 aaKnown RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 UXTQ9UBK9 157 aaPredicted RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 CRYL1Q9Y2S2 319 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 TRIM49D1C9J1S8 452 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 H3BQ06 376 aaPredicted RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 S100BP04271 92 aaPredicted RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 SERPIND1P05546 499 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 GALNT3Q14435 633 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 GKAP1Q5VSY0 366 aaPredicted RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 NAPEPLDQ6IQ20 393 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 ZNF449Q6P9G9 518 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 PRR23CQ6ZRP0 262 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 ARL8AQ96BM9 186 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 CSPG4P5Q96PW8 444 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 TRABDQ9H4I3 376 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 CYP4F12Q9HCS2 524 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 PTPRHQ9HD43 1115 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 CXXC1Q9P0U4 656 aaPredicted RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 CYTH4Q9UIA0 394 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 NDRG2Q9UN36 371 aaKnown RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 MFHAS1Q9Y4C4 1052 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 PCDHB9Q9Y5E1 797 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 STYXL1Q9Y6J8 313 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 FOXO6A8MYZ6 492 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 PIRO00625 290 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 MFSD11O43934 449 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 MT-CO1P00395 513 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 TROVE2P10155 538 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNX13-202ENST00000409604 GFAPP14136 432 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 RPL22P35268 128 aaKnown RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 GHRHRQ02643 423 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 FAAP100Q0VG06 881 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 C2orf27AQ580R0 203 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms