RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 SNX12Q9UMY4 172 aa13.44□□□□□ -0.26
LIMS2-203ENST00000409254 NUMBLQ9Y6R0 609 aa13.44□□□□□ -0.26
LIMS2-203ENST00000409254 LRRD1A4D1F6 860 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 ESPNB1AK53 854 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 ARNTLO00327 626 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 EEF2KO00418 725 aaKnown RBP13.43□□□□□ -0.26
LIMS2-203ENST00000409254 CACNG3O60359 315 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 CDKN2BP42772 138 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 TFF2Q03403 129 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 E2F5Q15329 346 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 KCNT1Q5JUK3 1230 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 ARTNQ5T4W7 220 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 SEL1L2Q5TEA6 688 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 DAB2IPQ5VWQ8 1189 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 RAP1GAP2Q684P5 730 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 TXNRD3NBQ6F5E7 133 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 FBXL22Q6P050 247 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 ADGRG2Q8IZP9 1017 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 HSPH1Q92598 858 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 PRICKLE1Q96MT3 831 aaPredicted RBP13.43□□□□□ -0.26
LIMS2-203ENST00000409254 RPRD1AQ96P16 312 aaPredicted RBP13.43□□□□□ -0.26
LIMS2-203ENST00000409254 LRRC3BQ96PB8 259 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 CSPG4P5Q96PW8 444 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 ASB2Q96Q27 587 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 KCTD15Q96SI1 283 aaPredicted RBP13.43□□□□□ -0.26
LIMS2-203ENST00000409254 KCNK12Q9HB15 430 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 SLC2A4RGQ9NR83 387 aa13.43□□□□□ -0.26
LIMS2-203ENST00000409254 XPO7Q9UIA9 1087 aaKnown RBP13.43□□□□□ -0.26
LIMS2-203ENST00000409254 A0A0C4DFX4 3053 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 hCG_1818297A0A087WSY0 165 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 NCAM2O15394 837 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 CYP17A1P05093 508 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 IL9P15248 144 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 HOXD9P28356 352 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 EPHB2P29323 1055 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 SLC6A4P31645 630 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 NR2C2P49116 596 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 YBEYP58557 167 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 GAD2Q05329 585 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 ZNF33AQ06730 810 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 ITPRIPL2Q3MIP1 535 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 PPP6R3Q5H9R7 873 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 ZFYVE27Q5T4F4 411 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 FYB2Q5VWT5 728 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 SLC9A4Q6AI14 798 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 SPOCD1Q6ZMY3 1216 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 BBS12Q6ZW61 710 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 BZW1Q7L1Q6 419 aaKnown RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 NLRP14Q86W24 1093 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 CPNE8Q86YQ8 564 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 CCDC117Q8IWD4 279 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 LGI2Q8N0V4 545 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 RTL3Q8N8U3 475 aaKnown RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 WBP2Q969T9 261 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 C16orf45Q96MC5 204 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 RNF157Q96PX1 679 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 WDR24Q96S15 920 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 CALN1Q9BXU9 219 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 FRMD8P1Q9BZ68 369 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 SIK2Q9H0K1 926 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 ARHGEF4Q9NR80 690 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 CWC15Q9P013 229 aaKnown RBP13.42□□□□□ -0.26
LIMS2-203ENST00000409254 ZNF212Q9UDV6 495 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 VANGL2Q9ULK5 521 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 TBC1D30Q9Y2I9 924 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 CKAP5Q14008 2032 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 CUL9Q8IWT3 2517 aa13.42□□□□□ -0.26
LIMS2-203ENST00000409254 ANKRD36A6QL64 1941 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 MUC22E2RYF6 1773 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-203ENST00000409254 DCLK1O15075 740 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 TJP3O95049 919 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 ADH5P11766 374 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 SRFP11831 508 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 GOT1P17174 413 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 TGM2P21980 687 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 IL4RP24394 825 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 MARCKSL1P49006 195 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 NDST2P52849 883 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 TDGQ13569 410 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 RUNX3Q13761 415 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 DMC1Q14565 340 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 PAFAH1B3Q15102 231 aaKnown RBP13.41□□□□□ -0.26
LIMS2-203ENST00000409254 DHCR24Q15392 516 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 CA9Q16790 459 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 ANKRD20A8PQ5CZ79 823 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 C6orf118Q5T5N4 469 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 DCAF12L1Q5VU92 463 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 UMODL1-AS1Q8N2C9 162 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 RASGEF1CQ8N431 466 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.41□□□□□ -0.26
LIMS2-203ENST00000409254 TTC13Q8NBP0 860 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 RAPGEF5Q92565 580 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 ASIC4Q96FT7 647 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 RPGRIP1Q96KN7 1286 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 XPO6Q96QU8 1125 aaKnown RBP13.41□□□□□ -0.26
LIMS2-203ENST00000409254 OSBPL9Q96SU4 736 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 KXD1Q9BQD3 176 aa13.41□□□□□ -0.26
LIMS2-203ENST00000409254 OSBPL8Q9BZF1 889 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms