RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 AADATQ8N5Z0 425 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 MFSD2AQ8NA29 543 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 TAF4BQ92750 862 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 TMA16Q96EY4 203 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 THSD1Q9NS62 852 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 A0A1B0GVM2 712 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 TERTO14746 1132 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 OPA1O60313 960 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 CSO75390 466 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 SLC8A1P32418 973 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 PSMD8P48556 350 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 HARS2P49590 506 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 SKOR1P84550 965 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 E2F4Q16254 413 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 COLEC12Q5KU26 742 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 C9orf64Q5T6V5 341 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 SLC25A45Q8N413 288 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 OR14C36Q8NHC7 312 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 LMLNQ96KR4 655 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 MRGPRX3Q96LB0 322 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 KBTBD4Q9NVX7 518 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 ARHGAP20Q9P2F6 1191 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 TFIP11Q9UBB9 837 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 TPX2Q9ULW0 747 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 SMC3Q9UQE7 1217 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 AHCTF1Q8WYP5 2266 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 TDRD6O60522 2096 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 A0A1W2PNU3 283 aaPredicted RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 LATS1O95835 1130 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 HLA-DRAP01903 254 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 RPN1P04843 607 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 GOT1P17174 413 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 PIK3CAP42336 1068 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 ST8SIA6P61647 398 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 CEBPZQ03701 1054 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 ADGRF1Q5T601 910 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 IGF2-ASQ6U949 168 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 SND1Q7KZF4 910 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 SV2AQ7L0J3 742 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 BHLHA9Q7RTU4 235 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 TMC6Q7Z403 805 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 PIGZQ86VD9 579 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 IQCHQ86VS3 1027 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 OR4C6Q8NH72 309 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 TTC17Q96AE7 1141 aa13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 CGNQ9P2M7 1197 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 INTS6Q9UL03 887 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 HBS1LQ9Y450 684 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 HEMK1Q9Y5R4 338 aaPredicted RBP13.36□□□□□ -0.27
CHRNA1-203ENST00000409219 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 MAGEC1O60732 1142 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 TBL1XO60907 577 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 SLFN14P0C7P3 912 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 CD58P19256 250 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 DRD3P35462 400 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 CSKP41240 450 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 ARID5BQ14865 1188 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 C3orf38Q5JPI3 329 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 RFWD3Q6PCD5 774 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 MFN1Q8IWA4 741 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 EXD3Q8N9H8 876 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 NDRG1Q92597 394 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 FAM129BQ96TA1 746 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 FAM117AQ9C073 453 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 APOBEC3GQ9HC16 384 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 OLA1Q9NTK5 396 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 UCKL1Q9NWZ5 548 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 SFMBT1Q9UHJ3 866 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 SATB2Q9UPW6 733 aa13.35□□□□□ -0.27
CHRNA1-203ENST00000409219 KIF26BQ2KJY2 2108 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TLN1Q9Y490 2541 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 ITIH6Q6UXX5 1313 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3DA0A087WVF3 549 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3IA0A087WXS9 549 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3EA0A087X179 549 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3KA0A087X1G2 549 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 LY6G6EA0A0G2JKS1 128 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 VPS37CA5D8V6 355 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3FA6NER0 549 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TTC34A8MYJ7 566 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3LB9A6J9 549 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 FFAR2O15552 330 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 LZTS3O60299 673 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 ADH1BP00325 375 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 ASLP04424 464 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3HP0C7X1 549 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 GIMD1P0DJR0 217 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 CKMT1AP12532 417 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 DGKAP23743 735 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 MAT2AP31153 395 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 SLC6A4P31645 630 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TKTL1P51854 596 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 METAP1P53582 386 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 NFKB2Q00653 900 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 OVGP1Q12889 678 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms