RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 HTR3CQ8WXA8 447 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 MECRQ9BV79 373 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 ETNK2Q9NVF9 386 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 TMEM59LQ9UK28 342 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 ADAM28Q9UKQ2 775 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 VPS9D1Q9Y2B5 631 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 NR2E1Q9Y466 385 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 TKTP29401 623 aaKnown RBP18.04■□□□□ 0.48
SMPD4-202ENST00000409031 RGS4P49798 205 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 AQP4P55087 323 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 KLF10Q13118 480 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 BAATQ14032 418 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-202ENST00000409031 ADGRD1Q6QNK2 874 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 PLEKHM3Q6ZWE6 761 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 SLC7A14Q8TBB6 771 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 PHF21AQ96BD5 680 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 CATSPERBQ9H7T0 1116 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 ASTN2O75129 1339 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-202ENST00000409031 KRT6BP04259 564 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 MIPP30301 263 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 KRT6CP48668 564 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 RARRES1P49788 294 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 PLIN5Q00G26 463 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 PTPN11Q06124 597 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-202ENST00000409031 SZRD1Q7Z422 152 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 NUAK2Q9H093 628 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 RPAP3Q9H6T3 665 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-202ENST00000409031 POLG2Q9UHN1 485 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 PRR23AA6NEV1 266 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 SNPHO15079 494 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 PMPCBO75439 489 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 AMPD1P23109 780 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 RBL1P28749 1068 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 CD151P48509 253 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 WDR49Q8IV35 697 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 ENDOVQ8N8Q3 282 aaKnown RBP18.04■□□□□ 0.48
SMPD4-202ENST00000409031 ITFG1Q8TB96 612 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 HAS1Q92839 578 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 CLEC4MQ9H2X3 399 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-202ENST00000409031 TSR3Q9UJK0 312 aaKnown RBP18.04■□□□□ 0.48
SMPD4-202ENST00000409031 PIAS1O75925 651 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 RAD17O75943 681 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 BNIP2Q12982 314 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 SQLEQ14534 574 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 C1orf186Q6ZWK4 172 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 SNX31Q8N9S9 440 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 APPL2Q8NEU8 664 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 RMND5AQ9H871 391 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 TRIM39Q9HCM9 518 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 PKP3Q9Y446 797 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 C5orf58C9J3I9 102 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 TRAFD1O14545 582 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 NCAM2O15394 837 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 BANF1O75531 89 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ATG7O95352 703 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 DDX5P17844 614 aaKnown RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 NAMPTP43490 491 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 PPIL2Q13356 520 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 NFIL3Q16649 462 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 OTOP1Q7RTM1 612 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 DNAJC1Q96KC8 554 aaKnown RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 GPATCH1Q9BRR8 931 aaKnown RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ACP6Q9NPH0 428 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 MAN1C1Q9NR34 630 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 KLHL20Q9Y2M5 609 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ROBO3Q96MS0 1386 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 hCG_1818297A0A087WSY0 165 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ZBTB11O95625 1053 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 CHRM1P11229 460 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 WDR4P57081 412 aaKnown RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 MYL6P60660 151 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 RPL26P61254 145 aaKnown RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 DGCR6Q14129 220 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 TAB1Q15750 504 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 TKFCQ3LXA3 575 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 GALNTL6Q49A17 601 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ATG14Q6ZNE5 492 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ERI1Q8IV48 349 aaKnown RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 RBM12BQ8IXT5 1001 aaKnown RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 SCAIQ8N9R8 606 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 LPAR1Q92633 364 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 FAM120BQ96EK7 910 aaKnown RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ASB2Q96Q27 587 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 RNF112Q9ULX5 631 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 MTF2Q9Y483 593 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 GMEB1Q9Y692 573 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 H0YGN5 161 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 VAPBO95292 243 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 HIST1H2AGP0C0S8 130 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 HIST1H2ADP20671 130 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 MAGEA8P43361 318 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 NPY2RP49146 381 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 C6orf52Q5T4I8 152 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ZBTB46Q86UZ6 589 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 SCN4BQ8IWT1 228 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 HIST1H2AHQ96KK5 128 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 HIST1H2AJQ99878 128 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 H2AFJQ9BTM1 129 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 SPON2Q9BUD6 331 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 ROGDIQ9GZN7 287 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms