RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ZNF557Q8N988 423 aaPredicted RBP19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 FOXJ1Q92949 421 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 TTC17Q96AE7 1141 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 CNTNAP3BQ96NU0 1288 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 NOX5Q96PH1 765 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 GTPBP2Q9BX10 602 aaKnown RBP19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 NAA15Q9BXJ9 866 aaKnown RBP19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 CNTNAP3Q9BZ76 1288 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 ASNSD1Q9NWL6 643 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 TAB2Q9NYJ8 693 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 ASPMQ8IZT6 3477 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 KCNU1A8MYU2 1149 aa19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 LUC7L3O95232 432 aaKnown RBP19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 OXTRP30559 389 aa19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 CT47A1Q5JQC4 288 aaPredicted RBP19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 SYCP2LQ5T4T6 812 aa19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 SMYD5Q6GMV2 418 aa19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 OR2I1PQ8NGU4 316 aa19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 PRMT1Q99873 361 aaKnown RBP19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 SYNCQ9H7C4 482 aa19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 MAP1BP46821 2468 aaKnown RBP19.95■□□□□ 0.78
SMARCB1-204ENST00000407422 H0Y626 953 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 UCHL3P15374 230 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 CYP11B1P15538 503 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 EEF1GP26641 437 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 CTSOP43234 321 aaPredicted RBP19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 NUMBP49757 651 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 RPS14P62263 151 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 SLC6A3Q01959 620 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 PITRM1Q5JRX3 1037 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 CIR1Q86X95 450 aaPredicted RBP19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 ATP6V0D2Q8N8Y2 350 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 ENOX1Q8TC92 643 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 MRGPRX3Q96LB0 322 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 NUP58Q9BVL2 599 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 MEI4A8MW99 385 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 F5H5T6 163 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 C7P10643 843 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 CCR1P32246 355 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 BPIFB4P59827 614 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 NME3Q13232 169 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 PLEKHG6Q3KR16 790 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 WDR45BQ5MNZ6 344 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 TAF3Q5VWG9 929 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 RBM43Q6ZSC3 357 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 SLC26A9Q7LBE3 791 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 RABEPKQ7Z6M1 372 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 CCDC117Q8IWD4 279 aaPredicted RBP19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 APCDD1Q8J025 514 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 CADM4Q8NFZ8 388 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 DNASE2BQ8WZ79 361 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 RNF34Q969K3 372 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 ADAM33Q9BZ11 813 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 SLC12A6Q9UHW9 1150 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 CEP83Q9Y592 693 aa19.94■□□□□ 0.78
SMARCB1-204ENST00000407422 WDFY3Q8IZQ1 3526 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 ARHGAP33O14559 1287 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 ABCB4P21439 1286 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 PMLP29590 882 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 ACSL1P33121 698 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 ATXN3P54252 364 aaPredicted RBP19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 DCAF12L1Q5VU92 463 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 OTUD1Q5VV17 481 aaPredicted RBP19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 DEFB124Q8NES8 71 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 MIR1-1HGQ9H1L0 117 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 VPS16Q9H269 839 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 PDCL3Q9H2J4 239 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 KIAA1522Q9P206 1035 aaPredicted RBP19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 SUN2Q9UH99 717 aa19.93■□□□□ 0.78
SMARCB1-204ENST00000407422 METTL12A8MUP2 240 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 DAB1O75553 588 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 ASLP04424 464 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 SLC2A3P11169 496 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 TFE3P19532 575 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 CDH5P33151 784 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 KLK7P49862 253 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 SNX16P57768 344 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 RNASE9P60153 205 aaKnown RBP19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 ST8SIA6P61647 398 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 CDKAL1Q5VV42 579 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 FBXL22Q6P050 247 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 NOP9Q86U38 636 aaKnown RBP19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 CCAR2Q8N163 923 aaKnown RBP19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 MINDY1Q8N5J2 469 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 TMEM35BQ8NCS4 154 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 SLCO3A1Q9UIG8 710 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 ERVW-1Q9UQF0 538 aa19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 NYNRINQ9P2P1 1898 aaKnown RBP19.92■□□□□ 0.78
SMARCB1-204ENST00000407422 TTC34A8MYJ7 566 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 F8VZ95 297 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 M0QYT0 321 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 SIN3BO75182 1162 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 GNSP15586 552 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 CSRP1P21291 193 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 NOS2P35228 1153 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 GGCXP38435 758 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 IRAK1P51617 712 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 CENPCQ03188 943 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 KRT31Q15323 416 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms