RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 SLC16A3O15427 465 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ZC3H11AO75152 810 aaKnown RBP eCLIP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ICAM1P05362 532 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 MYCLP12524 364 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 NAT1P18440 290 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PRKACBP22694 351 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CD151P48509 253 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 FXR2P51116 673 aaKnown RBP eCLIP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 UBXN2AP68543 259 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 TRAF3Q13114 568 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 MAPRE1Q15691 268 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 GALNTL6Q49A17 601 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SPDYAQ5MJ70 313 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 FAXCQ5TGI0 409 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SEL1L3Q68CR1 1132 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 OR6B2Q6IFH4 312 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 NIPAL1Q6NVV3 410 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ABRAXAS1Q6UWZ7 409 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SLCO6A1Q86UG4 719 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 DHFR2Q86XF0 187 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PCDH20Q8N6Y1 951 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 MAGEE2Q8TD90 523 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SGF29Q96ES7 293 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 B3GALT6Q96L58 329 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CIB1Q99828 191 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 C17orf80Q9BSJ5 609 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 MMTAG2Q9BU76 263 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 TMEM39BQ9GZU3 492 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 WDR41Q9HAD4 459 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PARVAQ9NVD7 372 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 NXF1Q9UBU9 619 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SNCAIPQ9Y6H5 919 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PNMA8CA0A1B0GUJ8 204 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 K7EPI3 171 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 TFECO14948 347 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ATP9BO43861 1147 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CCNT2O60583 730 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PPP1R11O60927 126 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CRTAMO95727 393 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SERPINA6P08185 405 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ZSCAN5DPP0CG00 497 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CCND2P30279 289 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CDH6P55285 790 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 BACE1P56817 501 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 MCCD1P59942 119 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 VAC14Q08AM6 782 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 AASDHQ4L235 1098 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SFT2D3Q587I9 215 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 WDR45BQ5MNZ6 344 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PPP2R2DQ66LE6 453 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 LDHDQ86WU2 507 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ZCCHC9Q8N567 271 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ZFP28Q8NHY6 868 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SPATA18Q8TC71 538 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ELMO1Q92556 727 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PROX1Q92786 737 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 VPS39Q96JC1 886 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 TBATAQ96M53 351 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SEPHS2Q99611 448 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 TOR3AQ9H497 397 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SLC38A10Q9HBR0 1119 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 RNF181Q9P0P0 153 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SPATA2Q9UM82 520 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ZNF536O15090 1300 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ADGRA2Q96PE1 1338 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L15C9J2P7 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L13C9JLJ4 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L11C9JVI0 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L18D6R9N7 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L22D6RA61 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L17D6RBQ6 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L19D6RCP7 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L20D6RJB6 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 GLRA3O75311 464 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 H6PDO95479 791 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CALB1P05937 261 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 RARBP10826 455 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 MYCLP1P12525 358 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 COX4I1P13073 169 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CPA3P15088 417 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 GNA15P30679 374 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 EPHX2P34913 555 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SOX6P35712 828 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ELK3P41970 407 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CDH15P55291 814 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 USP17L24Q0WX57 530 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PTK6Q13882 451 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 CAPRIN1Q14444 709 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 AGKQ53H12 422 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 RALGPS1Q5JS13 557 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 BROXQ5VW32 411 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SDE2Q6IQ49 451 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 RWDD4Q6NW29 188 aaKnown RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SLC2A7Q6PXP3 512 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PDZD4Q76G19 769 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PAGE2Q7Z2X7 111 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 ELMOD2Q8IZ81 293 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 PARP8Q8N3A8 854 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 SHCBP1Q8NEM2 672 aa5.99□□□□□ -1.45
HDAC9-203ENST00000406072 LRRC20Q8TCA0 184 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms