RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PSMG2Q969U7 264 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 FERMT1Q9BQL6 677 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 APOL5Q9BWW9 433 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 TSPYL1Q9H0U9 437 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 ZDHHC18Q9NUE0 388 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 DNMT3LQ9UJW3 386 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 HBS1LQ9Y450 684 aaKnown RBP21.66■■□□□ 1.06
TPM1-208ENST00000404484 DLL1O00548 723 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 DCLK1O15075 740 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 IFNB1P01574 187 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 ACTN2P35609 894 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 ATP5C1P36542 298 aaKnown RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 TRIP13Q15645 432 aaPredicted RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 ZC3H18Q86VM9 953 aaKnown RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 MREGQ8N565 214 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 FCRL2Q96LA5 508 aaPredicted RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 C1orf74Q96LT6 269 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 UHRF1Q96T88 793 aaPredicted RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 VIPAS39Q9H9C1 493 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 ZNF840PA6NDX5 716 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 FAM72CH0Y354 149 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 FGF10O15520 208 aaPredicted RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 TGM5O43548 720 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 LRIG2O94898 1065 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 C1RP00736 705 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 HOXB8P17481 243 aaPredicted RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 IVDP26440 423 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 GBE1Q04446 702 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 PDK1Q15118 436 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 SMAD2Q15796 467 aaKnown RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 SLC45A4Q5BKX6 768 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 FAM72AQ5TYM5 149 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 NUGGCQ68CJ6 796 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 FAM72DQ6L9T8 149 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 ZDHHC24Q6UX98 284 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 C4orf22Q6V702 233 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 RTL10Q7L3V2 364 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 FAM72BQ86X60 149 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 C12orf76Q8N812 135 aaPredicted RBP21.65■■□□□ 1.06
TPM1-208ENST00000404484 BTN2A3PQ96KV6 586 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 QKIQ96PU8 341 aaKnown RBP eCLIP21.65■■□□□ 1.061e-8■■■■■ 42
TPM1-208ENST00000404484 NACA2Q9H009 215 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 CATSPERBQ9H7T0 1116 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 DTLQ9NZJ0 730 aa21.65■■□□□ 1.06
TPM1-208ENST00000404484 SLC12A8A0AV02 714 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 MAP2K7O14733 419 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 PPP1R12AO14974 1030 aaPredicted RBP21.64■■□□□ 1.05
TPM1-208ENST00000404484 NCAM2O15394 837 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 IGLV3-27P01718 113 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 ERCC2P18074 760 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 EPHB2P29323 1055 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 VPS41P49754 854 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 PABPC1LQ4VXU2 614 aaKnown RBP21.64■■□□□ 1.05
TPM1-208ENST00000404484 LILRA6Q6PI73 481 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 CEP128Q6ZU80 1094 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 DNAJB7Q7Z6W7 309 aaPredicted RBP21.64■■□□□ 1.05
TPM1-208ENST00000404484 PCGF5Q86SE9 256 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 MIB1Q86YT6 1006 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 FBXO25Q8TCJ0 367 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 TBC1D31Q96DN5 1066 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 RTP4Q96DX8 246 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 OLFM3Q96PB7 478 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 NEUROG2Q9H2A3 272 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 CCSER2Q9H7U1 834 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 DONSONQ9NYP3 566 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 ANAPC5Q9UJX4 755 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 FAM50BQ9Y247 325 aa21.64■■□□□ 1.05
TPM1-208ENST00000404484 USP15Q9Y4E8 981 aaPredicted RBP21.64■■□□□ 1.05
TPM1-208ENST00000404484 BDP1A6H8Y1 2624 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 CLUHO75153 1309 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 MOCS2O96007 188 aaPredicted RBP21.63■■□□□ 1.05
TPM1-208ENST00000404484 GLUD1P00367 558 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 LRG1P02750 347 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 FAM153BP0C7A2 387 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 SPATA31D3P0C874 917 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 HOXC13P31276 330 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 GPS1Q13098 491 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 FAM153CQ494X1 144 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 IZUMO3Q5VZ72 239 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 SPATA31D4Q6ZUB0 917 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 UNC45BQ8IWX7 931 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 ELMOD1Q8N336 334 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 FAM71DQ8N9W8 422 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 TFB1MQ8WVM0 346 aaKnown RBP21.63■■□□□ 1.05
TPM1-208ENST00000404484 FOXP3Q9BZS1 431 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 BRD8Q9H0E9 1235 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 SIK2Q9H0K1 926 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 ETNK2Q9NVF9 386 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 FAM153AQ9UHL3 310 aa21.63■■□□□ 1.05
TPM1-208ENST00000404484 DNALI1O14645 258 aaPredicted RBP21.62■■□□□ 1.05
TPM1-208ENST00000404484 MFSD11O43934 449 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 TBX18O95935 607 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 MX2P20592 715 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 HSPA9P38646 679 aaKnown RBP21.62■■□□□ 1.05
TPM1-208ENST00000404484 P3H1Q32P28 736 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 MANEALQ5VSG8 457 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 SUSD6Q92537 303 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 GDAP1L1Q96MZ0 367 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 DZANK1Q9NVP4 752 aa21.62■■□□□ 1.05
TPM1-208ENST00000404484 PAK5Q9P286 719 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms