RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 HJURPQ8NCD3 748 aaPredicted RBP34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 TBC1D31Q96DN5 1066 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 TLR10Q9BXR5 811 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 STIM2Q9P246 746 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 NEU3Q9UQ49 428 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 JRKLQ9Y4A0 524 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 TRIOO75962 3097 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 DRGXA6NNA5 263 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 NEDD8-MDP1E9PL57 170 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 CNTN5O94779 1100 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 ADH1CP00326 375 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 EPHB2P29323 1055 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 RWDD2BP57060 319 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 MMRN1Q13201 1228 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 MAP7D3Q8IWC1 876 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 CPA6Q8N4T0 437 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 WDR24Q96S15 920 aa34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 PPARGC1AQ9UBK2 798 aaKnown RBP34.32■■■■□ 3.09
CSNK1E-204ENST00000403904 C3orf70A6NLC5 250 aaPredicted RBP34.32■■■■□ 3.08
CSNK1E-204ENST00000403904 IL4RP24394 825 aa34.32■■■■□ 3.08
CSNK1E-204ENST00000403904 ARL4AP40617 200 aa34.32■■■■□ 3.08
CSNK1E-204ENST00000403904 ALFQ53S48 1182 aa34.32■■■■□ 3.08
CSNK1E-204ENST00000403904 TSC1Q92574 1164 aa34.32■■■■□ 3.08
CSNK1E-204ENST00000403904 ZYG11BQ9C0D3 744 aa34.32■■■■□ 3.08
CSNK1E-204ENST00000403904 MARK1Q9P0L2 795 aa34.32■■■■□ 3.08
CSNK1E-204ENST00000403904 TYW5A2RUC4 315 aaKnown RBP34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 ZRANB2O95218 330 aaKnown RBP eCLIP34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 ADH5P11766 374 aa34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 TYRP14679 529 aa34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 ITPRIPL2Q3MIP1 535 aa34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 RFX8Q6ZV50 586 aa34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 EXD1Q8NHP7 514 aa34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 CSGALNACT1Q8TDX6 532 aa34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 UBE2Q2Q8WVN8 375 aa34.31■■■■□ 3.08
CSNK1E-204ENST00000403904 H3BRJ5 948 aa34.3■■■■□ 3.08
CSNK1E-204ENST00000403904 PENKP01210 267 aaPredicted RBP34.3■■■■□ 3.08
CSNK1E-204ENST00000403904 HOXD9P28356 352 aaPredicted RBP34.3■■■■□ 3.08
CSNK1E-204ENST00000403904 MFSD7Q6UXD7 560 aa34.3■■■■□ 3.08
CSNK1E-204ENST00000403904 RNF135Q8IUD6 432 aa34.3■■■■□ 3.08
CSNK1E-204ENST00000403904 CSPG4P5Q96PW8 444 aa34.3■■■■□ 3.08
CSNK1E-204ENST00000403904 DAPK3O43293 454 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 HOXC13P31276 330 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 ZNF135P52742 658 aaPredicted RBP34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 GAD2Q05329 585 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 NR1H3Q13133 447 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 MPP7Q5T2T1 576 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 TTC39BQ5VTQ0 682 aaPredicted RBP34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 ANKS1BQ7Z6G8 1248 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 TFAP2DQ7Z6R9 452 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 RCOR2Q8IZ40 523 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 GJD3Q8N144 294 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 NECAB3Q96P71 396 aaPredicted RBP34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 PSMB7Q99436 277 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 CD320Q9NPF0 282 aa34.29■■■■□ 3.08
CSNK1E-204ENST00000403904 A0A0C4DFX4 3053 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 ATP1A1P05023 1023 aaKnown RBP34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 SRFP11831 508 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 HTR7P34969 479 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 HCAR3P49019 387 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 LLGL1Q15334 1064 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 TJAP1Q5JTD0 557 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 DCAF12L1Q5VU92 463 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 CCDC50Q8IVM0 306 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 NAT16Q8N8M0 369 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 C16orf45Q96MC5 204 aaPredicted RBP34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 ZNF670Q9BS34 389 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 RCOR3Q9P2K3 495 aaPredicted RBP34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 SORCS3Q9UPU3 1222 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 COL4A3Q01955 1670 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 HOXC11O43248 304 aaPredicted RBP34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 PYGMP11217 842 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 DPYSQ14117 519 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 NYAP1Q6ZVC0 841 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 RBM41Q96IZ5 413 aaKnown RBP34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 TRPV5Q9NQA5 729 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 CLEC4EQ9ULY5 219 aa34.28■■■■□ 3.08
CSNK1E-204ENST00000403904 A0A1B0GVM2 712 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 TCAF2A6NFQ2 919 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 AMPD1P23109 780 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 GJA4P35212 333 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 CDH4P55283 916 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 ZNF211Q13398 564 aaPredicted RBP34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 GAB4Q2WGN9 574 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 ANKRD20A8PQ5CZ79 823 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 AADACL2Q6P093 401 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 SPOCD1Q6ZMY3 1216 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 CARNMT1Q8N4J0 409 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 CATSPERBQ9H7T0 1116 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 DUSP12Q9UNI6 340 aa34.27■■■■□ 3.08
CSNK1E-204ENST00000403904 COL4A2P08572 1712 aa34.26■■■■□ 3.08
CSNK1E-204ENST00000403904 RHOQP17081 205 aa34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 ERCC2P18074 760 aa34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 CDKN2BP42772 138 aa34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 SOX9P48436 509 aa34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 ETF1P62495 437 aaKnown RBP34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 NLRP14Q86W24 1093 aa34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 DNASE1L2Q92874 299 aa34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 ARHGEF4Q9NR80 690 aa34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 SLC2A4RGQ9NR83 387 aa34.26■■■■□ 3.07
CSNK1E-204ENST00000403904 KCNK3O14649 394 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms