RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 PRPSAP2O60256 369 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 PROSCO94903 275 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 LUC7L3O95232 432 aaKnown RBP17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 IPO7O95373 1038 aaKnown RBP17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 HLA-FP30511 346 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 PCK1P35558 622 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 TNFRSF4P43489 277 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 MESDQ14696 234 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 GEN1Q17RS7 908 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 PREPLQ4J6C6 727 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ALFQ53S48 1182 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 EFHC2Q5JST6 749 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ACBD5Q5T8D3 534 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 CYP4V2Q6ZWL3 525 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 RHOT2Q8IXI1 618 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 CCAR2Q8N163 923 aaKnown RBP17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 NIPA2Q8N8Q9 360 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 FIBINQ8TAL6 211 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 RFFLQ8WZ73 363 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 DESI2Q9BSY9 194 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 LUC7LQ9NQ29 371 aaKnown RBP17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ABCB8Q9NUT2 735 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 MPP6Q9NZW5 540 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 USP18Q9UMW8 372 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 SLC27A6Q9Y2P4 619 aa17.73■□□□□ 0.43
PTCHD3P3-201ENST00000403073 IGLV3-10A0A075B6K4 115 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 RNF40O75150 1001 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 MTA2O94776 668 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 IL1R2P27930 398 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 CD70P32970 193 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 SSR1P43307 286 aaKnown RBP17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 NOP2P46087 812 aaKnown RBP17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 RPS9P46781 194 aaKnown RBP17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 AIF1P55008 147 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 CDH18Q13634 790 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 GAS6Q14393 721 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 TCEAL1Q15170 157 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 CA9Q16790 459 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 FBXO43Q4G163 708 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 C2orf27AQ580R0 203 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ERMARDQ5T6L9 678 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 TTC39BQ5VTQ0 682 aaPredicted RBP17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 CCDC117Q8IWD4 279 aaPredicted RBP17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 SYNPOQ8N3V7 929 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 LMLNQ96KR4 655 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 NCAPGQ9BPX3 1015 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 SNRNP25Q9BV90 132 aaKnown RBP17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ZWILCHQ9H900 591 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ZDHHC4Q9NPG8 344 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 NCOR1O75376 2440 aa17.72■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 CREB3O43889 395 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 LRIG2O94898 1065 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 L1CAMP32004 1257 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 TIE1P35590 1138 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 KRT83P78385 493 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 NRG1Q02297 640 aaPredicted RBP17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 LMAN2Q12907 356 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ZNF177Q13360 481 aaPredicted RBP17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 KCNT1Q5JUK3 1230 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 MANEALQ5VSG8 457 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 TMEM215Q68D42 235 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 TXNRD3NBQ6F5E7 133 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 RWDD4Q6NW29 188 aaKnown RBP17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 PKN3Q6P5Z2 889 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 NUDT18Q6ZVK8 323 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ANKS1BQ7Z6G8 1248 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 KIAA0907Q7Z7F0 614 aaPredicted RBP17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 ZYG11BQ9C0D3 744 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 LACRTQ9GZZ8 138 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 CHRDQ9H2X0 955 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 DHX35Q9H5Z1 703 aaKnown RBP17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 PPARGC1AQ9UBK2 798 aaKnown RBP17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 SALL4Q9UJQ4 1053 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 GGA2Q9UJY4 613 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 HCN2Q9UL51 889 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 AP4E1Q9UPM8 1137 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 DUSP10Q9Y6W6 482 aa17.71■□□□□ 0.43
PTCHD3P3-201ENST00000403073 A0A0U1RQJ8 604 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 A0A1B0GVM2 712 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 TCAF2A6NFQ2 919 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 CLDN11O75508 207 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 PABPC1P11940 636 aaKnown RBP17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 ARHGAP25P42331 645 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 KIR2DL1P43626 348 aaPredicted RBP17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 NUMBP49757 651 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 VAV2P52735 878 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 CDH4P55283 916 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 SLC25A11Q02978 314 aaKnown RBP17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 MTAPQ13126 283 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 SMTNL2Q2TAL5 461 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 BOLA3Q53S33 107 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 CXorf57Q6NSI4 855 aaKnown RBP17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 CHST9Q7L1S5 443 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 TFAP2DQ7Z6R9 452 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 KIAA1328Q86T90 577 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 ADIPOR2Q86V24 386 aa17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTCHD3P3-201ENST00000403073 DTWD2Q8NBA8 298 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms