RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 GDAP1L1Q96MZ0 367 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 GBP5Q96PP8 586 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 UHRF1Q96T88 793 aaPredicted RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 MXRA8Q9BRK3 442 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 KIFC3Q9BVG8 833 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 IFIH1Q9BYX4 1025 aaKnown RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 NT5C3AQ9H0P0 336 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 AZI2Q9H6S1 392 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 WDR6Q9NNW5 1121 aaKnown RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 MRPL40Q9NQ50 206 aaKnown RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 KCNH7Q9NS40 1196 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 PAQR5Q9NXK6 330 aaPredicted RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 PKD2L1Q9P0L9 805 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 CEP72Q9P209 647 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 REV1Q9UBZ9 1251 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 ATP6V1HQ9UI12 483 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SPEF1Q9Y4P9 236 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 STON1Q9Y6Q2 735 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 TTC28Q96AY4 2481 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SPTBN5Q9NRC6 3674 aaKnown RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 A0A088AWK7 358 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 GSTTP1A0A1W2PQM5 241 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 WDR91A4D1P6 747 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 MBLAC1A4D2B0 266 aaPredicted RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 VWA3AA6NCI4 1184 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SMCO2A6NFE2 343 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 RRN3P2A6NIE6 340 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SRRM3A6NNA2 597 aaPredicted RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 TGFBR3LH3BV60 316 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 RAD51BO15315 384 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 POLR2DO15514 142 aaKnown RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 STX10O60499 249 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 PLOD3O60568 738 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 NIPSNAP2O75323 286 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 PDE5AO76074 875 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 IFNA14P01570 189 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 MT-ND3P03897 115 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 P4HA1P13674 534 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 MARK3P27448 753 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 PHBP35232 272 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 IDUAP35475 653 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SLC1A1P43005 524 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 AK2P54819 239 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 HTRA4P83105 476 aaPredicted RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 OTUD4Q01804 1114 aaKnown RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 LRMPQ12912 555 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 PTK2BQ14289 1009 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 GRIK4Q16099 956 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 KIAA1841Q6NSI8 718 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 CNSTQ6PJW8 725 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 PLEKHM3Q6ZWE6 761 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SPRED2Q7Z698 418 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SLC9B2Q86UD5 537 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 CAMKK1Q8N5S9 505 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 CCNYL1Q8N7R7 359 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 RNF169Q8NCN4 708 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 TOP1MTQ969P6 601 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 YME1L1Q96TA2 773 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SDF4Q9BRK5 362 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 DESI2Q9BSY9 194 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 C9orf16Q9BUW7 83 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 PRR14Q9BWN1 585 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 ANO3Q9BYT9 981 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SUGCTQ9HAC7 445 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 MRM3Q9HC36 420 aaKnown RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 TCF7L1Q9HCS4 588 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 BARHL2Q9NY43 387 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 TNFRSF10DQ9UBN6 386 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SLC9A2Q9UBY0 812 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 SALL4Q9UJQ4 1053 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 TUBE1Q9UJT0 475 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 FAF1Q9UNN5 650 aaPredicted RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 ANKRD6Q9Y2G4 727 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 GPR52Q9Y2T5 361 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 CBY1Q9Y3M2 126 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 HBS1LQ9Y450 684 aaKnown RBP6.33□□□□□ -1.4
CLIP4-202ENST00000401605 HRH3Q9Y5N1 445 aa6.33□□□□□ -1.4
CLIP4-202ENST00000401605 A0A1B0GVL5 298 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 CENPBD1B2RD01 187 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 H0Y626 953 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 PSMD9O00233 223 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 HGSO14964 777 aaPredicted RBP6.32□□□□□ -1.4
CLIP4-202ENST00000401605 CILPO75339 1184 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 PRPF6O94906 941 aaKnown RBP6.32□□□□□ -1.4
CLIP4-202ENST00000401605 KLHL2O95198 593 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 KRT75O95678 551 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 HMGN1P05114 100 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 SNRPAP09012 282 aaKnown RBP6.32□□□□□ -1.4
CLIP4-202ENST00000401605 MYBL1P10243 752 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 GRNP28799 593 aaKnown RBP6.32□□□□□ -1.4
CLIP4-202ENST00000401605 SREBF1P36956 1147 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 PCYT1AP49585 367 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 GDI2P50395 445 aaKnown RBP6.32□□□□□ -1.4
CLIP4-202ENST00000401605 METAP2P50579 478 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLIP4-202ENST00000401605 CENPCQ03188 943 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 RELAQ04206 551 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 FRG1Q14331 258 aaKnown RBP6.32□□□□□ -1.4
CLIP4-202ENST00000401605 CNGA2Q16280 664 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 ASIC2Q16515 512 aa6.32□□□□□ -1.4
CLIP4-202ENST00000401605 ANKRD20A2Q5SQ80 823 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms