RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CSKP41240 450 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 PRCPP42785 496 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 CTSOP43234 321 aaPredicted RBP12.38□□□□□ -0.43
LINC00544-201ENST00000400540 NUMBP49757 651 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 PMS1P54277 932 aaKnown RBP12.38□□□□□ -0.43
LINC00544-201ENST00000400540 RPS24P62847 133 aaKnown RBP12.38□□□□□ -0.43
LINC00544-201ENST00000400540 PNOCQ13519 176 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 FSCBQ5H9T9 825 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 NCEH1Q6PIU2 408 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 MFN1Q8IWA4 741 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 CARNMT1Q8N4J0 409 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 GANCQ8TET4 914 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 GOLGA1Q92805 767 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 KAT5Q92993 513 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 NUCKS1Q9H1E3 243 aaKnown RBP12.38□□□□□ -0.43
LINC00544-201ENST00000400540 FBXL12Q9NXK8 326 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 FTSJ1Q9UET6 329 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 TDRD6O60522 2096 aaKnown RBP12.38□□□□□ -0.43
LINC00544-201ENST00000400540 A0A1B0GTQ1 180 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 A0A1W2PPC4 97 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 TTC34A8MYJ7 566 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 M0QYV0 167 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 PLK4O00444 970 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 VILLO15195 856 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 PAPSS1O43252 624 aaPredicted RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 ZNF202O95125 648 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 LTFP02788 710 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 SLC11A2P49281 568 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 GALCP54803 685 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 C21orf59P57076 290 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 TBX4P57082 545 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 DNAJC3Q13217 504 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 KCNJ12Q14500 433 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 SHBQ15464 509 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 CST6Q15828 149 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 HNRNPA1L2Q32P51 320 aaKnown RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 MPP7Q5T2T1 576 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 C9orf64Q5T6V5 341 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 NUGGCQ68CJ6 796 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 ANKRD40Q6AI12 368 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 TMEM270Q6UE05 265 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 LCLAT1Q6UWP7 414 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 USP30Q70CQ3 517 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 MMAAQ8IVH4 418 aaKnown RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 CFAP52Q8N1V2 620 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 SCML4Q8N228 414 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 HJURPQ8NCD3 748 aaPredicted RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 ADAM32Q8TC27 787 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 SLC35F5Q8WV83 523 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 ERCC4Q92889 916 aaPredicted RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 SLC35C1Q96A29 364 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 TTC17Q96AE7 1141 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 FCRL2Q96LA5 508 aaPredicted RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 ACE2Q9BYF1 805 aaPredicted RBP12.37□□□□□ -0.43
LINC00544-201ENST00000400540 MIS12Q9H081 205 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 NEUROG2Q9H2A3 272 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 SUN2Q9UH99 717 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 NCKAP1Q9Y2A7 1128 aa12.37□□□□□ -0.43
LINC00544-201ENST00000400540 ARID1BQ8NFD5 2236 aaPredicted RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 IRAK2O43187 625 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 RNASEH2AO75792 299 aaKnown RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 MOCS2O96007 188 aaPredicted RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 FYNP06241 537 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 PSMD8P48556 350 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 ST8SIA6P61647 398 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 RACK1P63244 317 aaKnown RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 PITRM1Q5JRX3 1037 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 UNC45BQ8IWX7 931 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 AADATQ8N5Z0 425 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 FIBINQ8TAL6 211 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 PIP4K2CQ8TBX8 421 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 DQX1Q8TE96 717 aaKnown RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 IRGQQ8WZA9 623 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 ELF4Q99607 663 aaPredicted RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 XPO7Q9UIA9 1087 aaKnown RBP12.36□□□□□ -0.43
LINC00544-201ENST00000400540 ERVW-1Q9UQF0 538 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 PCDHB4Q9Y5E5 795 aa12.36□□□□□ -0.43
LINC00544-201ENST00000400540 TENM4Q6N022 2769 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 MGAQ8IWI9 3026 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 A0A087WV48 116 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 A0A1W2PR77 199 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 C10orf142B7Z368 130 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 ENC1O14682 589 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 VAV1P15498 845 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 TBXAS1P24557 533 aaPredicted RBP12.35□□□□□ -0.43
LINC00544-201ENST00000400540 STK19P49842 368 aaPredicted RBP12.35□□□□□ -0.43
LINC00544-201ENST00000400540 METAP1P53582 386 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 PPP2CBP62714 309 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 PPP2CAP67775 309 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 CDH18Q13634 790 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 INAVAQ3KP66 663 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms