RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CAPGP40121 348 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 MAGEA10P43363 369 aaPredicted RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 GOLM1Q8NBJ4 401 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 MTERF3Q96E29 417 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ERVK-5Q9HDB9 667 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 SMPD3Q9NY59 655 aaPredicted RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ENOPH1Q9UHY7 261 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 USP21Q9UK80 565 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 LIASO43766 372 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 RBP3P10745 1247 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 PRKCQQ04759 706 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 C1QBPQ07021 282 aaKnown RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 KLF10Q13118 480 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 CCDC157Q569K6 752 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 GJB7Q6PEY0 223 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 HPS6Q86YV9 775 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 FAM162AQ96A26 154 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ZNF577Q9BSK1 485 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ADAM33Q9BZ11 813 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 RIC8BQ9NVN3 520 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 MRPL39Q9NYK5 338 aaKnown RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 BAIAP2Q9UQB8 552 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 MTF2Q9Y483 593 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 AXIN1O15169 862 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 NUAK1O60285 661 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 CST8O60676 142 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 TSC22D2O75157 780 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 CYP11B1P15538 503 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ACTR2P61160 394 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 TP53BP2Q13625 1128 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 CLPTM1LQ96KA5 538 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 MED15Q96RN5 788 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 FAM118BQ9BPY3 351 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SP140LQ9H930 580 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 NEK6Q9HC98 313 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 LSM8O95777 96 aaKnown RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 BMP3P12645 472 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ELK3P41970 407 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 FASTKQ14296 549 aaKnown RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 FRG1Q14331 258 aaKnown RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 DMC1Q14565 340 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SNRNP48Q6IEG0 339 aaKnown RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 THAP5Q7Z6K1 395 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 GPD1LQ8N335 351 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 FLAD1Q8NFF5 587 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 WDR36Q8NI36 951 aaKnown RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 DCAF4Q8WV16 495 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ZNF560Q96MR9 790 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 TEX12Q9BXU0 123 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 TMEM245Q9H330 911 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 NCKIPSDQ9NZQ3 722 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SNX7Q9UNH6 387 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ARHGAP23Q9P227 1491 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 PREX1Q8TCU6 1659 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 GOLGA8JA6NMD2 632 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ATMINO43313 823 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-203ENST00000400060 PRKD3O94806 890 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 C8BP07358 591 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 NPR3P17342 541 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 GJA9P57773 515 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 MPP1Q00013 466 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SCARF1Q14162 830 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 DLGAP5Q15398 846 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SPATS1Q496A3 300 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 PPP2R2DQ66LE6 453 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 UGT2A3Q6UWM9 527 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 NLRX1Q86UT6 975 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ZDHHC13Q8IUH4 622 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 UNC5BQ8IZJ1 945 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SDR16C5Q8N3Y7 309 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SPATA18Q8TC71 538 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 UBASH3BQ8TF42 649 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SLC44A1Q8WWI5 657 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SLC35C1Q96A29 364 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 COA7Q96BR5 231 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ASB2Q96Q27 587 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 CPNE1Q99829 537 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 SLC6A15Q9H2J7 730 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 HSPBP1Q9NZL4 362 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 ANKMY1Q9P2S6 941 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 C3orf18Q9UK00 162 aa10.18□□□□□ -0.78
PTPRM-203ENST00000400060 APRTP07741 180 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 OR2B6P58173 313 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 TAF5Q15542 800 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 ARSHQ5FYA8 562 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 TNFAIP8L3Q5GJ75 292 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 TMEM270Q6UE05 265 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 PROSER1Q86XN7 944 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 ZNF486Q96H40 463 aaPredicted RBP10.17□□□□□ -0.78
PTPRM-203ENST00000400060 NSMCE2Q96MF7 247 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 ADI1Q9BV57 179 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 EHD3Q9NZN3 535 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 SDR42E2A6NKP2 422 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 KBTBD13C9JR72 458 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 H3BNH8 94 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 TNFRSF21O75509 655 aa10.17□□□□□ -0.78
PTPRM-203ENST00000400060 RGS20O76081 388 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms